Plasmodium knowlesi strain:Malayan Strain Pk1 (A+) (ID 377737) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from Nucleotide

Accession: PRJNA377737 ID: 377737

Plasmodium knowlesi strain:Malayan Strain Pk1 (A+)

Plasmodium knowlesi Pk1 (A+) Malayan H strain Genome Sequencing, Assembly, and Annotation

See Genome Information for Plasmodium knowlesi

Navigate Up

This project is a component of the An Integrated Approach to Understanding Host-Pathogen Interactions

Navigate Across

17 additional projects are components of the An Integrated Approach to Understanding Host-Pathogen Interactions.

9 additional projects are related by organism.

PacBio assembly and Hi-C correction of the Plasmodium knowlesi Pk1 (A+) Malayan H strain genome sequence

Accession	PRJNA377737
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Plasmodium knowlesi[Taxonomy ID: 5850] Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium knowlesi
Publications	Lapp SA et al., "PacBio assembly of a Plasmodium knowlesi genome sequence with Hi-C correction and manual annotation of the SICAvar gene family.", Parasitology, 2018 Jan;145(1):71-84
Grants	"Contract, awarded by NIAID" (Grant ID HHSN272201200031C, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 15-May-2017 Malaria Host Pathogen Interaction Center - University of Georgia
Related Resources	Malaria Host Pathogen Interaction Center Website Malaria Host Pathogen Interaction Center Data
Relevance	Medical
Locus Tag Prefix	PKNOH

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	31
WGS master	1
Genomic DNA	2
SRA Experiments	7
Protein Sequences	5217
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

Download

Assembly	Level	WGS	BioSample	Taxonomy
GCA_002140095.1	Scaffold	NETL00000000	SAMN06469831	Plasmodium knowlesi

SRA Data Details

Parameter	Value
Data volume, Gbases	19
Data volume, Mbytes	53931

Supplemental Content

Related information

Assembly
All related Assemblies
BioProject
Links from project to related projects
BioSample
All related BioSamples
Full text in PMC
PMC links
Genome
Related Genomes
Genomic DNA
Link to genomic DNA records
Nucleotide
Related Nucleotide entry
Protein
Related Proteins
PubMed
PubMed Links
SRA
All related SRA Experiments
Taxonomy
Taxonomy Links
Umbrella projects
All Umbrella projects
WGS master
Link to WGS master record(s)

Related Resources

Malaria Host Pathogen Interaction Center Website
Malaria Host Pathogen Interaction Center Website
Malaria Host Pathogen Interaction Center Data
Malaria Host Pathogen Interaction Center Data

LinkOut to external resources

GOLD: Gp0219970 [Genomes On Line Database]
GOLD: Gp0219970
Genomes On Line Database
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

Recent activity

Clear Turn Off Turn On

BioProject Links for Nucleotide (Select 1192742132) (1)
BioProject
Plasmodium knowlesi strain:Malayan Strain Pk1 (A+)
Plasmodium knowlesi strain:Malayan Strain Pk1 (A+)
Plasmodium knowlesi Pk1 (A+) Malayan H strain Genome Sequencing, Assembly, and Annotation

BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

BioProject

Result Filters