Bordetella pertussis (ID 266616) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from Nucleotide

Accession: PRJNA266616 ID: 266616

Bordetella pertussis

Bordetella pertussis Genome sequencing and assembly

See Genome Information for Bordetella pertussis

Navigate Across

119 additional projects are related by organism.

Comparison of virulence-related genes in pertactin-deficient and pertactin-positive Bordetella pertussis isolates through whole-genome sequencing

Accession	PRJNA266616
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Bordetella pertussis[Taxonomy ID: 520] Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis
Publications (total 3) Less...	Weigand MR et al., "The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement.", J Bacteriol, 2017 Apr 15;199(8) More... Weigand MR et al., "The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement.", J Bacteriol, 2017 Apr 15;199(8) Bowden KE et al., "Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics.", mSphere, 2016 May-Jun;1(3) Williams MM et al., "Bordetella pertussis Strain Lacking Pertactin and Pertussis Toxin.", Emerg Infect Dis, 2016 Feb;22(2):319-322 Less...
Submission	Registration date: 29-Mar-2016 Centers for Disease Control and Prevention
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	45
WGS master	2
Genomic DNA	36
SRA Experiments	118
Protein Sequences	136979
Publications
PubMed	3
PMC	3
Other datasets
BioSample	38
Assembly	38
Supplementary data
Base modification	35

Assembly details:

Download

Assembly level

Number of Assemblies

35
1
2
38

Assembly	WGS	Chrs	BioSample	Infraspecies Id	Taxonomy
GCA_001601785.1	JWLA00000000		SAMN03251820	I488	Bordetella pertussis
GCA_001601775.1	JWLB00000000		SAMN03216671	I517	Bordetella pertussis
GCA_001605525.1		1	SAMN03216670	I498	Bordetella pertussis
GCA_001605505.1		1	SAMN03216669	I496	Bordetella pertussis
GCA_001605605.1		1	SAMN03216675	I539	Bordetella pertussis
GCA_001605585.1		1	SAMN03216674	I538	Bordetella pertussis
GCA_001605565.1		1	SAMN03216673	I521	Bordetella pertussis
GCA_001605545.1		1	SAMN03216672	I518	Bordetella pertussis
GCA_001605705.1		1	SAMN03216665	I475	Bordetella pertussis
GCA_001605685.1		1	SAMN03216679	I707	Bordetella pertussis
GCA_001605665.1		1	SAMN03216678	I669	Bordetella pertussis
GCA_001605645.1		1	SAMN03216677	I656	Bordetella pertussis
GCA_001605625.1		1	SAMN03216676	I646	Bordetella pertussis
GCA_001605135.1		1	SAMN03249362	H375	Bordetella pertussis
GCA_001605115.1		1	SAMN03249368	H559	Bordetella pertussis
GCA_001605095.1		1	SAMN03249365	H380	Bordetella pertussis
GCA_001605075.1		1	SAMN03249364	H379	Bordetella pertussis
GCA_001605055.1		1	SAMN03249363	H378	Bordetella pertussis
GCA_001605035.1		1	SAMN03249361	H374	Bordetella pertussis
GCA_001605485.1		1	SAMN03216668	I483	Bordetella pertussis
GCA_001605465.1		1	SAMN03216667	I480	Bordetella pertussis
GCA_001605445.1		1	SAMN03216666	I476	Bordetella pertussis
GCA_001605425.1		1	SAMN03249380	I472	Bordetella pertussis
GCA_001605405.1		1	SAMN03249379	I469	Bordetella pertussis
GCA_001605385.1		1	SAMN03249378	I468	Bordetella pertussis
GCA_001605365.1		1	SAMN03167927	H788	Bordetella pertussis
GCA_001605345.1		1	SAMN03249377	H564	Bordetella pertussis
GCA_001605295.1		1	SAMN03249374	E476	Bordetella pertussis
GCA_001605275.1		1	SAMN03249373	C393	Bordetella pertussis
GCA_001605255.1		1	SAMN03249371	H622	Bordetella pertussis
GCA_001605235.1		1	SAMN03249370	H563	Bordetella pertussis
GCA_001605215.1		1	SAMN03249369	H561	Bordetella pertussis
GCA_001605195.1		1	SAMN03249367	H542	Bordetella pertussis
GCA_001605175.1		1	SAMN03249366	H489	Bordetella pertussis
GCA_001605155.1		1	SAMN03249372	H627	Bordetella pertussis
GCA_001628735.1		1	SAMN03249375	I344	Bordetella pertussis
GCA_001509915.1		1	SAMN03249376	I979	Bordetella pertussis
GCA_001509895.1		1	SAMN03366100	H321	Bordetella pertussis

SRA Data Details

Parameter	Value
Data volume, Gbases	91
Data volume, Tbytes	0.29

BioProject

Result Filters

Display Settings:

Send to:

Links from Nucleotide

Bordetella pertussis

Bordetella pertussis Genome sequencing and assembly

Supplemental Content

Related information

LinkOut to external resources

Recent activity