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Organizing biological data

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Select item 7729131.

Molecular characterization of VIM-producing Enterobacterales from Czech hospitals

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Charles University in Prague

Accession:: PRJNA772913
ID:: 772913

Select item 7660392.

Citrobacter freundii

Citrobacter freundii Genome sequencing and assembly

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

The First Affiliated Hospital of Wenzhou Medical University

Accession:: PRJNA766039
ID:: 766039

Select item 7627333.

Enterobacterales

Whole-genome sequencing of carbapenemase-producing enterobacterales in Toho University Omori Medical Center, Tokyo, Japan

Taxonomy:: Enterobacterales

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Toho University

Accession:: PRJDB12305
ID:: 762733

Select item 7005164.

Molecular characterization of KPC-producing Enterobacterales from Czech hospitals; evidence of an epidemic spread

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Charles University in Prague

Accession:: PRJNA700516
ID:: 700516

Select item 6929015.

Citrobacter freundii sp. PSV genome

Complete genome of Citrobacter freundii sp. PSV, isolated from a crude-oil-degrading consortium

: Project data type: Other

Scope:: Monoisolate

Genetique Moleculaire, Genomique, Microbiologie (GMGM), Universite de Strasbourg

Accession:: PRJEB40360
ID:: 692901

Select item 6475486.

Enterobacter hormaechei

Enterobacter hormaechei Genome sequencing

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Charles University in Prague

Accession:: PRJNA647548
ID:: 647548

Select item 6423487.

Citrobacter freundii strain:M92

Citrobacter freundii strain:M92 Genome sequencing

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing

Scope:: Monoisolate

Chinese Academy of Agricultural Sciences

Accession:: PRJNA642348
ID:: 642348

Select item 6368278.

Nanopore MinION sequencing reveals possible transfer of blaKPC-2 plasmid across bacterial species in two healthcare facilities

: Project data type: Genome sequencing

Scope:: Multispecies

Wadsworth Center, New York State Department of Health

Accession:: PRJNA636827
ID:: 636827

Select item 6271949.

Clinical isolates sequencing

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Scientific Center for Anti-infectious Drugs (SCAID)

Accession:: PRJNA627194
ID:: 627194

Select item 60514710.

Enterobacterales

The environmental REsistome: confluence of Human and Animal Biota in antibiotic resistance spread (REHAB)

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

The REHAB Consortium

Accession:: PRJNA605147
ID:: 605147

Select item 60471511.

Citrobacter freundii strain:CitB

Citrobacter freundii strain:CitB Genome sequencing

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing

Scope:: Monoisolate

Universidade Federal de Sao paulo

Accession:: PRJNA604715
ID:: 604715

Select item 60410012.

Environmental dissemination of Carbapenemase-producing Enterobacteriaceae in Switzerland

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

University of Zurich

Accession:: PRJNA604100
ID:: 604100

Select item 59902413.

Citrobacter freundii

Citrobacter freundii Genome sequencing and assembly

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Center for Disease Control and Prevention of PLA

Accession:: PRJNA599024
ID:: 599024

Select item 59213414.

Novel type of Carbapenem-hydrolyzing Oxacillinase on resistance plasmid Inc A/C2 conferring multi-drug resistance to Citrobacter freundii.

: Project data type: Raw sequence reads

Scope:: Multispecies

tel-aviv sourasky medical center

Accession:: PRJNA592134
ID:: 592134

Select item 58949615.

Citrobacter freundii

Citrobacter freundii Assembly

Taxonomy:: Citrobacter freundii

: Project data type: Assembly

Scope:: Multiisolate

Center for Disease Control and Prevention of PLA

Accession:: PRJNA589496
ID:: 589496

Select item 57994316.

Citrobacter freundii producing OXA-48, complete genome

: Project data type: Genome sequencing

Scope:: Multispecies

University of Bern

Accession:: PRJNA579943
ID:: 579943

Select item 56177917.

Citrobacter freundii strain:KCJ3K347

Citrobacter freundii strain:KCJ3K347 Genome sequencing and assembly

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

University of Florida

Accession:: PRJNA561779
ID:: 561779

Select item 55001418.

Bacteria

Genomic Dynamics of Species and Mobile Genetic Elements in a Prolonged blaIMP-4-associated Carbapenemase Outbreak in an Australian Hospital

Taxonomy:: Bacteria (eubacteria)

: Project data type: Genome sequencing

Scope:: Multispecies

University of Oxford

Accession:: PRJNA550014
ID:: 550014

Select item 54463919.

Citrobacter freundii

Citrobacter freundii Genome sequencing and assembly

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Wenzhou Medical University

Accession:: PRJNA544639
ID:: 544639

Select item 53430620.

Enterobacteriales

A collection of carbapenemase producing Enterobacteriales from an outbreak investigation Raw sequence reads

: Project data type: Raw sequence reads

Scope:: Multispecies

Public Health Agency of Canada

Accession:: PRJNA534306
ID:: 534306

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