S. flexneri infected Henle-407 cells were treated with and without 20 mM formate, RNA-seq was used to determine transcriptome changes
Overall design: S. flexneri 2457T WT, Henle-407 cells as host, ± 20 mM formate, mock control
| Accession | PRJNA489738; GEO: GSE119622 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multispecies |
| Publications | Koestler BJ et al., "Formate Promotes Shigella Intercellular Spread and Virulence Gene Expression.", mBio, 2018 Sep 25;9(5) |
| Grants | - "Role of carbon metabolism in virulence of Shigella flexneri" (Grant ID R01 AI016935, National Institute of Allergy and Infectious Diseases Extramural Activities)
|
| Submission | Registration date: 6-Sep-2018
Koestler, Biological Sciences, Western Michigan University |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 3 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 3 |
| GEO DataSets | 1 |