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Accession: PRJNA1106891 ID: 1106891

Natural Products Discovery Center at The Wertheim UF Scripps Institute

The Natural Products Discovery Center (NPDC) at The Wertheim UF Scripps Institute hosts one of the world's largest collections of Actinobacteria. More...
AccessionPRJNA1106891
Data TypeGenome sequencing
ScopeMultispecies
PublicationsKalkreuter E et al., "The Natural Products Discovery Center: Release of the First 8490 Sequenced Strains for Exploring Actinobacteria Biosynthetic Diversity.", bioRxiv, 2024 May 2;
SubmissionRegistration date: 1-May-2024
The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology
Related Resources
RelevanceStrain Collection
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)10163
WGS master10162
Genomic DNA1
SRA Experiments2418
Protein Sequences3872
Publications
PubMed1
PMC1
Other datasets
BioSample15224
Assembly10163
Assembly details:
Assembly levelNumber of Assemblies
1
9999
163
10163
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_042743745.1ScaffoldJBHYMW000000000
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NPDC021559
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NPDC048605
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NPDC006443
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SAMN43798040
NPDC059551
GCA_042268155.1ScaffoldJBHJUH000000000
SAMN43787631
NPDC056186
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NPDC048339
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NPDC018050
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SAMN43993964
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NPDC057578
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NPDC057016
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NPDC050589
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SAMN43996404
NPDC050160
GCA_044459245.1ScaffoldJBITIS000000000
SAMN43996427
NPDC050356
GCA_044459365.1ScaffoldJBITIV000000000
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NPDC050337
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SAMN43798097
NPDC059634
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NPDC059660
GCA_040608535.1ScaffoldJBEXII000000000
SAMN41498937
NPDC005175
GCA_040608695.1ScaffoldJBEXIS000000000
SAMN41495817
NPDC005111
GCA_040648575.1ScaffoldJBEZDZ000000000
SAMN41497900
NPDC049116
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NPDC049702
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NPDC049659
GCA_040654995.1ScaffoldJBFAJB000000000
SAMN41499268
NPDC050573
GCA_040646915.1ScaffoldJBEZBF000000000
SAMN41496552
NPDC044970
GCA_040295765.1ScaffoldJBEPFU000000000
SAMN41495786
NPDC002705
GCA_040295185.1ScaffoldJBEOUZ000000000
SAMN41495601
NPDC002897
GCA_040300705.1ScaffoldJBEPEF000000000
SAMN41495192
NPDC000304
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SAMN41495970
NPDC049696
GCA_042897515.1ScaffoldJBIAYJ000000000
SAMN43992403
NPDC001019
GCA_042874395.1ScaffoldJBIANB000000000
SAMN43992709
NPDC003991
GCA_042873815.1ScaffoldJBIAMA000000000
SAMN43992738
NPDC004445
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SAMN41496986
NPDC046746
GCA_040610215.1ScaffoldJBEXLX000000000
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NPDC004370
GCA_044459925.1ScaffoldJBITJL000000000
SAMN43996406
NPDC050162
GCA_043197235.1ScaffoldJBICSS000000000
SAMN43996298
NPDC049238
GCA_042899335.1ScaffoldJBIAZS000000000
SAMN43992363
NPDC000095
GCA_040300765.1ScaffoldJBEPEI000000000
SAMN41495191
NPDC000239
GCA_042898655.1ScaffoldJBIAZA000000000
SAMN43992385
NPDC000396
GCA_042898365.1ScaffoldJBIAYX000000000
SAMN43992388
NPDC000509
GCA_040299985.1ScaffoldJBEPDA000000000
SAMN41495475
NPDC000563
GCA_042893955.1ScaffoldJBIAVG000000000
SAMN43992485
NPDC001559
GCA_040298085.1ScaffoldJBEOZN000000000
SAMN41495532
NPDC001681
GCA_040295985.1ScaffoldJBEOWK000000000
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NPDC002524
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SAMN41495782
NPDC002544
GCA_042888905.1ScaffoldJBIAQI000000000
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NPDC002721
GCA_042873875.1ScaffoldJBIAMC000000000
SAMN43992736
NPDC004379
GCA_040607515.1ScaffoldJBEXGU000000000
SAMN41495653
NPDC005286
GCA_040614315.1ScaffoldJBEXUG000000000
SAMN41495843
NPDC006007
GCA_040614275.1ScaffoldJBEXUE000000000
SAMN41497804
NPDC006013
GCA_040635605.1ScaffoldJBEYID000000000
SAMN41496276
NPDC006930
GCA_040631445.1ScaffoldJBEYAB000000000
SAMN41496294
NPDC020072
GCA_040631275.1ScaffoldJBEXZT000000000
SAMN41496103
NPDC020145
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SAMN41496312
NPDC023615
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NPDC023825
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NPDC023963
GCA_040653115.1ScaffoldJBEZNH000000000
SAMN41498085
NPDC048047
GCA_040649875.1ScaffoldJBEZGG000000000
SAMN41498114
NPDC048865
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SAMN41496792
NPDC049046
GCA_040648855.1ScaffoldJBEZEL000000000
SAMN41498117
NPDC049078
GCA_040678965.1ScaffoldJBFAQY000000000
SAMN41497907
NPDC049248
GCA_040678795.1ScaffoldJBFAQN000000000
SAMN41496378
NPDC049304
GCA_044466505.1ScaffoldJBITMT000000000
SAMN43996317
NPDC049376
GCA_040675205.1ScaffoldJBFAOJ000000000
SAMN41497661
NPDC049644
GCA_040655875.1ScaffoldJBFAKT000000000
SAMN41496589
NPDC050280
GCA_044459525.1ScaffoldJBITIZ000000000
SAMN43996419
NPDC050284
GCA_044456585.1ScaffoldJBITFY000000000
SAMN43996502
NPDC050855
GCA_040683035.1ScaffoldJBFBCF000000000
SAMN41498090
NPDC051022
GCA_040689595.1ScaffoldJBFBCE000000000
SAMN41497487
NPDC051023
GCA_044547605.1ScaffoldJBIUAX000000000
SAMN43996658
NPDC052375
GCA_044741965.1ScaffoldJBIUTQ000000000
SAMN43997235
NPDC087985
GCA_040681955.1ScaffoldJBFAZR000000000
SAMN41497684
NPDC051571
GCA_044901535.1ScaffoldJBJDPL000000000
SAMN43996785
NPDC062911
GCA_044543045.1ScaffoldJBITVR000000000
SAMN43996819
NPDC077485
GCA_044543285.1ScaffoldJBITVW000000000
SAMN43996813
NPDC077454
GCA_044542125.1ScaffoldJBITTV000000000
SAMN43996892
NPDC079370
GCA_043204175.1ScaffoldJBIDBV000000000
SAMN43996052
NPDC047964
GCA_043204315.1ScaffoldJBIDBY000000000
SAMN43996049
NPDC047943
GCA_042800035.1ScaffoldJBHVHV000000000
SAMN43796546
NPDC057660
GCA_040300125.1ScaffoldJBEPDF000000000
SAMN41495218
NPDC000476
GCA_040702505.1ScaffoldJBFBLC000000000
SAMN41497058
NPDC080008
GCA_044756765.1ContigJBIVTN000000000
SAMN43997760
NPDC091660
GCA_040678635.1ScaffoldJBFATZ000000000
SAMN41497958
NPDC052614
GCA_040611135.1ScaffoldJBEXNL000000000
SAMN41495608
NPDC003166
GCA_042739135.1ScaffoldJBHYHM000000000
SAMN43797693
NPDC059064
GCA_042738955.1ScaffoldJBHYHC000000000
SAMN43797703
NPDC059074
GCA_044763975.1ScaffoldJBIWHG000000000
SAMN43998004
NPDC094379
GCA_042796465.1ScaffoldJBHVNE000000000
SAMN43796765
NPDC057891
GCA_042887715.1ScaffoldJBHVOT000000000
SAMN43796782
NPDC057916
GCA_044767235.1ScaffoldJBIWNM000000000
SAMN43998306
NPDC101443
GCA_044543515.1ScaffoldJBITWC000000000
SAMN43996805
NPDC077409
GCA_044755065.1ScaffoldJBIVQH000000000
SAMN43997848
NPDC092409
GCA_042884395.1ScaffoldJBHVTY000000000
SAMN43796943
NPDC058134
GCA_042893865.1ScaffoldJBIAVD000000000
SAMN43992488
NPDC001589
GCA_042892105.1ScaffoldJBIATS000000000
SAMN43992527
NPDC001837
GCA_042891995.1ScaffoldJBIATR000000000
SAMN43992528
NPDC001842
GCA_042897115.1ScaffoldJBIAXX000000000
SAMN43992415
NPDC001145
GCA_042898415.1ScaffoldJBIAYV000000000
SAMN43992390
NPDC000556
GCA_042900745.1ScaffoldJBIBBP000000000
SAMN43993232
NPDC012872
GCA_042900585.1ScaffoldJBIBBK000000000
SAMN43993237
NPDC012898
GCA_042900515.1ScaffoldJBIBBG000000000
SAMN43993241
NPDC012908
GCA_042899935.1ScaffoldJBIBAN000000000
SAMN43993260
NPDC013069
GCA_042873155.1ScaffoldJBIALF000000000
SAMN43992760
NPDC004972
GCA_042880235.1ScaffoldJBHVZB000000000
SAMN43797082
NPDC058309
GCA_042901605.1ScaffoldJBIBDA000000000
SAMN43993192
NPDC012716
GCA_042901565.1ScaffoldJBIBDB000000000
SAMN43993191
NPDC012710
GCA_042901805.1ScaffoldJBIBDH000000000
SAMN43993184
NPDC012674
GCA_042901245.1ScaffoldJBIBCM000000000
SAMN43993207
NPDC012787
GCA_042901225.1ScaffoldJBIBCQ000000000
SAMN43993203
NPDC012761
GCA_042900945.1ScaffoldJBIBCA000000000
SAMN43993220
NPDC012823
GCA_042900825.1ScaffoldJBIBBU000000000
SAMN43993226
NPDC012844
GCA_042900785.1ScaffoldJBIBBT000000000
SAMN43993227
NPDC012848
GCA_042901925.1ScaffoldJBIBDM000000000
SAMN43993179
NPDC012655
GCA_042956595.1ScaffoldJBIBGP000000000
SAMN43993089
NPDC008225
GCA_042738935.1ScaffoldJBHYHK000000000
SAMN43797695
NPDC059066
GCA_042739025.1ScaffoldJBHYHO000000000
SAMN43797691
NPDC059062
GCA_042739035.1ScaffoldJBHYHI000000000
SAMN43797697
NPDC059068
GCA_042739015.1ScaffoldJBHYHH000000000
SAMN43797698
NPDC059069
GCA_042739155.1ScaffoldJBHYHL000000000
SAMN43797694
NPDC059065
GCA_042739195.1ScaffoldJBHYHU000000000
SAMN43797685
NPDC059055
GCA_042738985.1ScaffoldJBHYHJ000000000
SAMN43797696
NPDC059067
GCA_042739235.1ScaffoldJBHYHT000000000
SAMN43797686
NPDC059056
GCA_042739265.1ScaffoldJBHYHP000000000
SAMN43797690
NPDC059060
GCA_042739415.1ScaffoldJBHYHW000000000
SAMN43797683
NPDC059053
GCA_042739395.1ScaffoldJBHYHS000000000
SAMN43797687
NPDC059057
GCA_042739355.1ScaffoldJBHYHZ000000000
SAMN43797680
NPDC059049
GCA_042739315.1ScaffoldJBHYHR000000000
SAMN43797688
NPDC059058
GCA_042739595.1ScaffoldJBHYIF000000000
SAMN43797673
NPDC059039
GCA_042739515.1ScaffoldJBHYHX000000000
SAMN43797682
NPDC059052
GCA_042739495.1ScaffoldJBHYHQ000000000
SAMN43797689
NPDC059059
GCA_042739475.1ScaffoldJBHYIC000000000
SAMN43797677
NPDC059046
GCA_042740335.1ScaffoldJBHYJF000000000
SAMN43797643
NPDC059005
GCA_042740415.1ScaffoldJBHYJO000000000
SAMN43797634
NPDC058995
GCA_042740635.1ScaffoldJBHYJL000000000
SAMN43797637
NPDC058999
GCA_042740625.1ScaffoldJBHYJE000000000
SAMN43797644
NPDC059006
GCA_042740805.1ScaffoldJBHYJQ000000000
SAMN43797632
NPDC058993
GCA_042740895.1ScaffoldJBHYJN000000000
SAMN43797635
NPDC058997
GCA_042735955.1ScaffoldJBHWAX000000000
SAMN43798034
NPDC059543
GCA_042736325.1ScaffoldJBHWVY000000000
SAMN43798384
NPDC060052
GCA_042740955.1ScaffoldJBHYJP000000000
SAMN43797633
NPDC058994
GCA_042740935.1ScaffoldJBHYJT000000000
SAMN43797629
NPDC058990
GCA_042740835.1ScaffoldJBHYJM000000000
SAMN43797636
NPDC058998
GCA_042740755.1ScaffoldJBHYJG000000000
SAMN43797642
NPDC059004
GCA_042740735.1ScaffoldJBHYJK000000000
SAMN43797638
NPDC059000
GCA_042746185.1ScaffoldJBHYQB000000000
SAMN43797447
NPDC058748
GCA_042745905.1ScaffoldJBHYPM000000000
SAMN43797462
NPDC058765
GCA_042746755.1ScaffoldJBHYQM000000000
SAMN43797436
NPDC058736
GCA_042747535.1ScaffoldJBHYRG000000000
SAMN43797413
NPDC058712
GCA_042751835.1ScaffoldJBHYWO000000000
SAMN43797937
NPDC059399
GCA_042801505.1ScaffoldJBHVFV000000000
SAMN43796469
NPDC057566
GCA_042792395.1ScaffoldJBHTWK000000000
SAMN43795815
NPDC056633
GCA_042724495.1ScaffoldJBHXFF000000000
SAMN43798656
NPDC127094
GCA_042734235.1ScaffoldJBHWEI000000000
SAMN43798124
NPDC059665
GCA_042672425.1ScaffoldJBHXVB000000000
SAMN43798719
NPDC127184
GCA_042673365.1ScaffoldJBHUSI000000000
SAMN43796054
NPDC057018
GCA_042668065.1ScaffoldJBHVAV000000000
SAMN43796324
NPDC057370
GCA_042667325.1ScaffoldJBHVAH000000000
SAMN43796308
NPDC057346
GCA_042667535.1ScaffoldJBHUZS000000000
SAMN43796292
NPDC057323
GCA_042670545.1ScaffoldJBHUVO000000000
SAMN43796156
NPDC057158
GCA_042670725.1ScaffoldJBHUVE000000000
SAMN43796146
NPDC057147
GCA_042671045.1ScaffoldJBHUUI000000000
SAMN43796119
NPDC057112
GCA_042669155.1ScaffoldJBHUUO000000000
SAMN43796127
NPDC057121
GCA_042669885.1ScaffoldJBHUUN000000000
SAMN43796125
NPDC057119
GCA_042670265.1ScaffoldJBHUWA000000000
SAMN43796173
NPDC057184
GCA_042261665.1ScaffoldJBHJQN000000000
SAMN43795608
NPDC056349
GCA_042266145.1ScaffoldJBHJRN000000000
SAMN43795577
NPDC056310
GCA_042274505.1ScaffoldJBHJXH000000000
SAMN43787510
NPDC056015
GCA_042269585.1ScaffoldJBHJXZ000000000
SAMN43787491
NPDC055985
GCA_044901105.1ScaffoldJBJDOP000000000
SAMN43996878
NPDC078856
GCA_044768415.1ScaffoldJBIWPT000000000
SAMN43998242
NPDC101147
GCA_044768545.1ScaffoldJBIVUU000000000
SAMN43997727
NPDC091288
GCA_044765025.1ScaffoldJBIWJI000000000
SAMN43997932
NPDC093535
GCA_044764545.1ScaffoldJBIWII000000000
SAMN43997959
NPDC094009
GCA_044749765.1ScaffoldJBIVIN000000000
SAMN43997441
NPDC088924
GCA_044748645.1ScaffoldJBIVGK000000000
SAMN43997509
NPDC089910
GCA_044754685.1ScaffoldJBIVPO000000000
SAMN43997867
NPDC093025
GCA_044741865.1ScaffoldJBIUTL000000000
SAMN43997240
NPDC088085
GCA_044741585.1ScaffoldJBIUSX000000000
SAMN43997255
NPDC088151
GCA_044747845.1ScaffoldJBIVEW000000000
SAMN43997554
NPDC090050
GCA_044747405.1ScaffoldJBIVEA000000000
SAMN43997577
NPDC090087
GCA_044548205.1ScaffoldJBIUBR000000000
SAMN43996636
NPDC052084
GCA_044547485.1ScaffoldJBIUAJ000000000
SAMN43996673
NPDC052527
GCA_044466225.1ScaffoldJBITMM000000000
SAMN43996324
NPDC049415
GCA_043204455.1ScaffoldJBIDCE000000000
SAMN43996043
NPDC047893
GCA_043202035.1ScaffoldJBICZS000000000
SAMN43996111
NPDC048235
GCA_043202275.1ScaffoldJBIDAC000000000
SAMN43996098
NPDC048214
GCA_043199235.1ScaffoldJBICVS000000000
SAMN43996217
NPDC048622
SRA Data Details
ParameterValue
Data volume, Gbases5,143
Data volume, Tbytes1.77

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