ID 496660 - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from BioSample

Accession: PRJEB26121 ID: 496660

EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Pacific Ocean - MP1788 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330126. This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Accession	PRJEB26121
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 16-Oct-2018 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1126
WGS master	28
Publications
PubMed	1
PMC	1
Other datasets
BioSample	28
Assembly	27

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

27
27

Assembly	WGS	BioSample	Taxonomy
GCA_950075115.1	CATMTS000000000	SAMEA112958478	Alteromonas macleodii
GCA_950054495.1	CATLQJ000000000	SAMEA112958473	Maritimibacter alkaliphilus
GCA_950075045.1	CATMTF000000000	SAMEA112958475	uncultured Alphaproteobacteria bacterium
GCA_950074985.1	CATMSZ000000000	SAMEA112958455	uncultured Candidatus Neomarinimicrobiota bacterium
GCA_950062865.1	CATLYS000000000	SAMEA112958474	uncultured Candidatus Neomarinimicrobiota bacterium
GCA_950062495.1	CATLXY000000000	SAMEA112958459	uncultured Candidatus Neomarinimicrobiota bacterium
GCA_950062565.1	CATLXT000000000	SAMEA112958465	uncultured Candidatus Poseidoniales archaeon
GCA_950074135.1	CATMSC000000000	SAMEA112958453	uncultured Candidatus Poseidoniales archaeon
GCA_950054275.1	CATLPA000000000	SAMEA112958452	uncultured Dehalococcoidia bacterium
GCA_950075185.1	CATMTM000000000	SAMEA112958476	uncultured Dehalococcoidia bacterium
GCA_950062595.1	CATLXU000000000	SAMEA112958461	uncultured Erythrobacteraceae bacterium
GCA_950074975.1	CATMTP000000000	SAMEA112958463	uncultured Gammaproteobacteria bacterium
GCA_950063035.1	CATLYN000000000	SAMEA112958467	uncultured Gammaproteobacteria bacterium
GCA_950071165.1	CATMMZ000000000	SAMEA112958468	uncultured Hyphomonas sp.
GCA_950063845.1	CATMBE000000000	SAMEA112958477	uncultured Kangiella sp.
GCA_950062415.1	CATLYB000000000	SAMEA112958458	uncultured Marinicella sp.
GCA_950054125.1	CATLPE000000000	SAMEA112958462	uncultured Nocardioides sp.
GCA_950074875.1	CATMSX000000000	SAMEA112958454	uncultured Pelagibacteraceae bacterium
GCA_950063125.1	CATLZI000000000	SAMEA112958470	uncultured Porticoccus sp.
GCA_950074215.1	CATMRV000000000	SAMEA112958460	uncultured Pseudomonadota bacterium
GCA_950054315.1	CATLPN000000000	SAMEA112958472	uncultured Pseudomonadota bacterium
GCA_950054255.1	CATLOR000000000	SAMEA112958457	uncultured Rickettsiales bacterium
GCA_950062485.1	CATLYH000000000	SAMEA112958464	uncultured Salinisphaerales bacterium
GCA_950074545.1	CATMST000000000	SAMEA112958469	uncultured Sinobacteraceae bacterium
GCA_950074165.1	CATMRT000000000	SAMEA112958456	uncultured Sulfitobacter sp.
GCA_950074715.1	CATMSK000000000	SAMEA112958466	uncultured archaeon
GCA_950054445.1	CATLOW000000000	SAMEA112958471	uncultured bacterium

BioProject

Result Filters

Display Settings:

Send to:

Links from BioSample

EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Pacific Ocean - MP1788 metagenome (marine metagenome) data set.

Supplemental Content

Related information

Recent activity