ID 863831 - BioProject

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Accession: PRJEB55076 ID: 863831

EMG produced TPA metagenomics assembly of PRJNA598094 data set (Metagenomes of bacteria colonizing the gut of Apis mellifera and Apis cerana Metagenome).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA598094, and was assembled with metaSPAdes v3. More...

Accession	PRJEB55076
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 30-Jul-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5189
WGS master	57
Publications
PubMed	1
PMC	1
Other datasets
BioSample	57
Assembly	57

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

57
57

Assembly	WGS	BioSample	Taxonomy
GCA_946476925.1	CAMKWD000000000	SAMEA110697419	Apibacter mensalis
GCA_946478545.1	CAMLCQ000000000	SAMEA110697446	Bartonella apis
GCA_946477045.1	CAMKXD000000000	SAMEA110697437	Bifidobacterium asteroides
GCA_946477005.1	CAMKWY000000000	SAMEA110697431	Bifidobacterium asteroides
GCA_946477765.1	CAMKZH000000000	SAMEA110697397	Bifidobacterium asteroides
GCA_946476745.1	CAMKVS000000000	SAMEA110697423	Bifidobacterium asteroides
GCA_946478445.1	CAMLBT000000000	SAMEA110697426	Bifidobacterium asteroides
GCA_946478405.1	CAMLBR000000000	SAMEA110697429	Bifidobacterium indicum
GCA_946478175.1	CAMLBB000000000	SAMEA110697414	Candidatus Syntrophosphaera thermopropionivorans
GCA_946478385.1	CAMLCG000000000	SAMEA110697399	Enterobacter asburiae
GCA_946478005.1	CAMLAL000000000	SAMEA110697396	Enterobacter cancerogenus
GCA_946478585.1	CAMLCP000000000	SAMEA110697445	Enterobacter cloacae
GCA_946476965.1	CAMKWZ000000000	SAMEA110697435	Frischella perrara
GCA_946477325.1	CAMKXX000000000	SAMEA110697415	Frischella perrara
GCA_946476865.1	CAMKVY000000000	SAMEA110697421	Fructobacillus fructosus
GCA_946477385.1	CAMKXY000000000	SAMEA110697401	Gibbsiella quercinecans
GCA_946476765.1	CAMKVU000000000	SAMEA110697433	Gilliamella apicola
GCA_946478065.1	CAMLAP000000000	SAMEA110697440	Gilliamella apicola
GCA_946477195.1	CAMKXT000000000	SAMEA110697405	Gilliamella apicola
GCA_946478475.1	CAMLCA000000000	SAMEA110697404	Gilliamella apicola
GCA_946476795.1	CAMKVX000000000	SAMEA110697424	Gilliamella apis
GCA_946478245.1	CAMLBH000000000	SAMEA110697403	Kluyvera cryocrescens
GCA_946476975.1	CAMKWV000000000	SAMEA110697439	Lactobacillus apis
GCA_946478485.1	CAMLBX000000000	SAMEA110697422	Lactobacillus apis
GCA_946477815.1	CAMKZQ000000000	SAMEA110697450	Lactobacillus apis
GCA_946477795.1	CAMKZJ000000000	SAMEA110697400	Lactobacillus apis
GCA_946477395.1	CAMKYC000000000	SAMEA110697447	Lactobacillus helsingborgensis
GCA_946478555.1	CAMLCN000000000	SAMEA110697436	Lactobacillus helsingborgensis
GCA_946478415.1	CAMLCB000000000	SAMEA110697402	Lactobacillus panisapium
GCA_946478615.1	CAMLCT000000000	SAMEA110697420	Lactobacillus panisapium
GCA_946477055.1	CAMKXG000000000	SAMEA110697449	Lonsdalea britannica
GCA_946477165.1	CAMKWW000000000	SAMEA110697434	Melissococcus plutonius
GCA_946478525.1	CAMLCH000000000	SAMEA110697425	Snodgrassella alvi
GCA_946478365.1	CAMLBS000000000	SAMEA110697407	Snodgrassella alvi
GCA_946476995.1	CAMKWX000000000	SAMEA110697444	Snodgrassella alvi
GCA_946477105.1	CAMKWU000000000	SAMEA110697442	uncultured Bartonella sp.
GCA_946477355.1	CAMKXN000000000	SAMEA110697395	uncultured Bartonella sp.
GCA_946476755.1	CAMKVQ000000000	SAMEA110697416	uncultured Bifidobacterium sp.
GCA_946478505.1	CAMLCE000000000	SAMEA110697443	uncultured Bifidobacterium sp.
GCA_946477115.1	CAMKXE000000000	SAMEA110697432	uncultured Citrobacter sp.
GCA_946476905.1	CAMKWF000000000	SAMEA110697428	uncultured Commensalibacter sp.
GCA_946477805.1	CAMKZP000000000	SAMEA110697398	uncultured Enterobacter sp.
GCA_946478625.1	CAMLCV000000000	SAMEA110697451	uncultured Gilliamella sp.
GCA_946476955.1	CAMKWK000000000	SAMEA110697427	uncultured Gilliamella sp.
GCA_946476915.1	CAMKWI000000000	SAMEA110697417	uncultured Gilliamella sp.
GCA_946477205.1	CAMKXR000000000	SAMEA110697412	uncultured Gilliamella sp.
GCA_946477095.1	CAMKXC000000000	SAMEA110697441	uncultured Lactobacillus sp.
GCA_946477245.1	CAMKXK000000000	SAMEA110697409	uncultured Lactobacillus sp.
GCA_946477125.1	CAMKWP000000000	SAMEA110697430	uncultured Lactobacillus sp.
GCA_946477965.1	CAMLAE000000000	SAMEA110697418	uncultured Lactobacillus sp.
GCA_946478575.1	CAMLCO000000000	SAMEA110697438	uncultured Lactobacillus sp.
GCA_946477235.1	CAMKXL000000000	SAMEA110697448	uncultured Lactobacillus sp.
GCA_946478535.1	CAMLCD000000000	SAMEA110697410	uncultured Lactobacillus sp.
GCA_946478395.1	CAMLCC000000000	SAMEA110697408	uncultured Lactobacillus sp.
GCA_946478255.1	CAMLBG000000000	SAMEA110697406	uncultured Neisseriaceae bacterium
GCA_946477365.1	CAMKXU000000000	SAMEA110697413	uncultured Spirochaetaceae bacterium
GCA_946477185.1	CAMKYB000000000	SAMEA110697411	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA598094 data set (Metagenomes of bacteria colonizing the gut of Apis mellifera and Apis cerana Metagenome).

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