metagenome (ID 785376) - BioProject

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Accession: PRJNA785376 ID: 785376

metagenome

a metagenome includes assembled sequences from hot spring and composting enrichment cultivation samples using lignin as substrate Metagenome

the goal of this study is to discover novel thermostable laccases which serves as lignin-degrading biocatalyst

Accession	PRJNA785376
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	metagenome[Taxonomy ID: 256318] unclassified sequences; metagenomes; metagenome
Submission	Registration date: 17-Mar-2023 Fudan University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	132
Other datasets
BioSample	134
Assembly	132

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

132
132

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_029265315.1	JAJUJM000000000	SAMN23615058	bin117	Actinomycetota bacterium
GCA_029265505.1	JAJUII000000000	SAMN23615028	bin86	Aeromicrobium choanae
GCA_029265795.1	JAJUGV000000000	SAMN23614989	bin46	Alcaligenaceae bacterium
GCA_029265335.1	JAJUJN000000000	SAMN23615059	bin118	Alcaligenaceae bacterium
GCA_029263615.1	JAJUFT000000000	SAMN23614961	bin18	Alcaligenaceae bacterium
GCA_029263795.1	JAJUFI000000000	SAMN23614950	bin7	Alcaligenaceae bacterium
GCA_029267415.1	JAJUIY000000000	SAMN23615044	bin102	Alcaligenaceae bacterium
GCA_029267315.1	JAJUJD000000000	SAMN23615049	bin108	Alcaligenaceae bacterium
GCA_029268265.1	JAJUGH000000000	SAMN23614975	bin32	Alcaligenaceae bacterium
GCA_029268595.1	JAJUGB000000000	SAMN23614969	bin26	Alcaligenaceae bacterium
GCA_029268535.1	JAJUGD000000000	SAMN23614971	bin28	Alcaligenaceae bacterium
GCA_029267365.1	JAJUJB000000000	SAMN23615047	bin105	Alloalcanivorax xenomutans
GCA_029268305.1	JAJUGE000000000	SAMN23614972	bin29	Alphaproteobacteria bacterium
GCA_029263555.1	JAJUFW000000000	SAMN23614964	bin21	Alphaproteobacteria bacterium
GCA_029265155.1	JAJUJV000000000	SAMN23615067	bin126	Altererythrobacter sp.
GCA_029265275.1	JAJUJP000000000	SAMN23615061	bin120	Alteromonadaceae bacterium
GCA_029265815.1	JAJUGU000000000	SAMN23614988	bin45	Anaerolineaceae bacterium
GCA_029268045.1	JAJUHF000000000	SAMN23614999	bin57	Anseongella ginsenosidimutans
GCA_029279925.1	JAJUHM000000000	SAMN23615006	bin64	Aquabacterium olei
GCA_029267875.1	JAJUHV000000000	SAMN23615015	bin73	Atopococcus tabaci
GCA_029265215.1	JAJUJS000000000	SAMN23615064	bin123	Avrilella dinanensis
GCA_029267555.1	JAJUIQ000000000	SAMN23615036	bin94	Azovibrio restrictus
GCA_029267815.1	JAJUHQ000000000	SAMN23615010	bin68	Bacillaceae bacterium
GCA_029263675.1	JAJUFO000000000	SAMN23614956	bin13	Bacillaceae bacterium
GCA_029268085.1	JAJUHD000000000	SAMN23614997	bin55	Bacillota bacterium
GCA_029265675.1	JAJUHZ000000000	SAMN23615019	bin77	Bacillus tuaregi
GCA_029268105.1	JAJUHB000000000	SAMN23614995	bin53	Bacteroidales bacterium
GCA_029265535.1	JAJUIH000000000	SAMN23615027	bin85	Bacteroides graminisolvens
GCA_029266015.1	JAJUFK000000000	SAMN23614952	bin9	Bacteroidota bacterium
GCA_029265715.1	JAJUGZ000000000	SAMN23614993	bin51	Bacteroidota bacterium
GCA_029268165.1	JAJUGM000000000	SAMN23614980	bin37	Bacteroidota bacterium
GCA_029265055.1	JAJUKA000000000	SAMN23615072	bin131	Billgrantia saliphila
GCA_029263585.1	JAJUFU000000000	SAMN23614962	bin19	Brevibacterium sp.
GCA_029268225.1	JAJUGJ000000000	SAMN23614977	bin34	Burkholderiales bacterium
GCA_029265635.1	JAJUID000000000	SAMN23615023	bin81	Candidatus Kapaibacterium sp.
GCA_029266075.1	JAJUFG000000000	SAMN23614948	bin5	Candidatus Nitrospira inopinata
GCA_029265195.1	JAJUJT000000000	SAMN23615065	bin124	Candidatus Paceibacterota bacterium
GCA_029263855.1	JAJUFC000000000	SAMN23614944	bin1	Candidatus Thermochlorobacteriaceae bacterium
GCA_029266045.1	JAJUFJ000000000	SAMN23614951	bin8	Caproiciproducens galactitolivorans
GCA_029267915.1	JAJUHL000000000	SAMN23615005	bin63	Cellulomonadaceae bacterium
GCA_029265355.1	JAJUJL000000000	SAMN23615057	bin116	Chloroflexota bacterium
GCA_029265085.1	JAJUJY000000000	SAMN23615070	bin129	Chloroflexota bacterium
GCA_029265975.1	JAJUGN000000000	SAMN23614981	bin38	Clostridiales bacterium
GCA_029265435.1	JAJUJH000000000	SAMN23615053	bin112	Clostridiales bacterium
GCA_029265405.1	JAJUJI000000000	SAMN23615054	bin113	Clostridiales bacterium
GCA_029267975.1	JAJUHH000000000	SAMN23615001	bin59	Clostridiales bacterium
GCA_029267755.1	JAJUHS000000000	SAMN23615012	bin70	Clostridiales bacterium
GCA_029268065.1	JAJUHC000000000	SAMN23614996	bin54	Clostridiales bacterium
GCA_029267545.1	JAJUIO000000000	SAMN23615034	bin92	Clostridiales bacterium
GCA_029265395.1	JAJUJK000000000	SAMN23615056	bin115	Desulfarculaceae bacterium
GCA_029267735.1	JAJUHU000000000	SAMN23615014	bin72	Desulfobulbus propionicus
GCA_029265015.1	JAJUKD000000000	SAMN23615075	bin134	Desulfobulbus sp.
GCA_029267695.1	JAJUIJ000000000	SAMN23615029	bin87	Desulfovibrionaceae bacterium
GCA_029265645.1	JAJUIA000000000	SAMN23615020	bin78	Desulfovibrionaceae bacterium
GCA_029268285.1	JAJUGG000000000	SAMN23614974	bin31	Ectothiorhodospiraceae bacterium
GCA_029263635.1	JAJUFY000000000	SAMN23614966	bin23	Ectothiorhodospiraceae bacterium
GCA_029267355.1	JAJUJA000000000	SAMN23615046	bin104	Elusimicrobiota bacterium
GCA_029267435.1	JAJUIV000000000	SAMN23615041	bin99	Elusimicrobiota bacterium
GCA_029267455.1	JAJUIX000000000	SAMN23615043	bin101	Enteractinococcus sp.
GCA_029265545.1	JAJUIG000000000	SAMN23615026	bin84	Enterobacter cloacae
GCA_029268025.1	JAJUHE000000000	SAMN23614998	bin56	Enterobacteriaceae bacterium
GCA_029267855.1	JAJUHP000000000	SAMN23615009	bin67	Enterobacteriaceae bacterium
GCA_029263655.1	JAJUFR000000000	SAMN23614959	bin16	Eubacteriales bacterium
GCA_029265175.1	JAJUJU000000000	SAMN23615066	bin125	Exiguobacterium sp.
GCA_029265595.1	JAJUIC000000000	SAMN23615022	bin80	Flavobacteriaceae bacterium
GCA_029265805.1	JAJUGX000000000	SAMN23614991	bin49	Galbibacter marinus
GCA_029265075.1	JAJUJZ000000000	SAMN23615071	bin130	Gammaproteobacteria bacterium
GCA_029263725.1	JAJUFS000000000	SAMN23614960	bin17	Gammaproteobacteria bacterium
GCA_029268325.1	JAJUGC000000000	SAMN23614970	bin27	Gammaproteobacteria bacterium
GCA_029265285.1	JAJUJO000000000	SAMN23615060	bin119	Georgenia sp.
GCA_029267295.1	JAJUJE000000000	SAMN23615050	bin109	Georgenia sp.
GCA_029268125.1	JAJUGP000000000	SAMN23614983	bin40	Georgenia sp.
GCA_029268345.1	JAJUGA000000000	SAMN23614968	bin25	Georgenia wutianyii
GCA_029263775.1	JAJUFN000000000	SAMN23614955	bin.12	Georgenia wutianyii
GCA_029265575.1	JAJUIE000000000	SAMN23615024	bin82	Gracilibacillus dipsosauri
GCA_029268495.1	JAJUGF000000000	SAMN23614973	bin30	Gracilibacillus sp.
GCA_029267525.1	JAJUIP000000000	SAMN23615035	bin93	Gracilinema caldarium
GCA_029265695.1	JAJUHW000000000	SAMN23615016	bin74	Gracilinema caldarium
GCA_029263755.1	JAJUFL000000000	SAMN23614953	bin10	Halomonas sp.
GCA_029263665.1	JAJUFQ000000000	SAMN23614958	bin15	Halomonas sp.
GCA_029263535.1	JAJUIF000000000	SAMN23615025	bin83	Halopseudomonas formosensis
GCA_029265935.1	JAJUFX000000000	SAMN23614965	bin22	Idiomarina sp.
GCA_029267335.1	JAJUJC000000000	SAMN23615048	bin107	Intestinibacillus massiliensis
GCA_029267595.1	JAJUIR000000000	SAMN23615037	bin95	Lachnospiraceae bacterium
GCA_029268185.1	JAJUGL000000000	SAMN23614979	bin36	Luteimonas sp.
GCA_029265735.1	JAJUHY000000000	SAMN23615018	bin76	Marinobacter segnicrescens
GCA_029264995.1	JAJUKC000000000	SAMN23615074	bin133	Marinobacter sp.
GCA_029267645.1	JAJUIM000000000	SAMN23615032	bin90	Microbacterium sp.
GCA_029263575.1	JAJUFV000000000	SAMN23614963	bin20	Microbacterium sp.
GCA_029267395.1	JAJUIZ000000000	SAMN23615045	bin103	Micrococcales bacterium
GCA_029267995.1	JAJUHG000000000	SAMN23615000	bin58	Micrococcales bacterium
GCA_029267635.1	JAJUIK000000000	SAMN23615030	bin88	Moraxellaceae bacterium
GCA_029265375.1	JAJUJJ000000000	SAMN23615055	bin114	Nesterenkonia sp.
GCA_029263715.1	JAJUFP000000000	SAMN23614957	bin14	Nitrososphaera sp.
GCA_029268205.1	JAJUGK000000000	SAMN23614978	bin35	Nocardioidaceae bacterium
GCA_029265115.1	JAJUJW000000000	SAMN23615068	bin127	Novilysobacter defluvii
GCA_029267825.1	JAJUHO000000000	SAMN23615008	bin66	Oscillospiraceae bacterium
GCA_029265455.1	JAJUJF000000000	SAMN23615051	bin110	Paracoccaceae bacterium
GCA_029279965.1	JAJUHJ000000000	SAMN23615003	bin61	Phyllobacteriaceae bacterium
GCA_029265945.1	JAJUGQ000000000	SAMN23614984	bin41	Piscibacillus halophilus
GCA_029267795.1	JAJUHR000000000	SAMN23615011	bin69	Planctomycetota bacterium
GCA_029267615.1	JAJUIN000000000	SAMN23615033	bin91	Planctomycetota bacterium
GCA_029265875.1	JAJUGS000000000	SAMN23614986	bin43	Prolixibacteraceae bacterium
GCA_029279945.1	JAJUHK000000000	SAMN23615004	bin62	Pseudidiomarina indica
GCA_029263785.1	JAJUFE000000000	SAMN23614946	bin3	Pusillimonas sp. (ex Stolz et al. 2005)
GCA_029268365.1	JAJUFZ000000000	SAMN23614967	bin24	Rhodocyclales bacterium
GCA_029267445.1	JAJUIU000000000	SAMN23615040	bin98	Rhodospirillaceae bacterium
GCA_029265995.1	JAJUFM000000000	SAMN23614954	bin11	Rhodospirillaceae bacterium
GCA_029265775.1	JAJUGW000000000	SAMN23614990	bin47	Saccharomonospora azurea
GCA_029263835.1	JAJUFD000000000	SAMN23614945	bin2	Saccharomonospora viridis
GCA_029265495.1	JAJUIW000000000	SAMN23615042	bin100	Saccharopolyspora rectivirgula
GCA_029265855.1	JAJUGT000000000	SAMN23614987	bin44	Salirhabdus sp.
GCA_029265225.1	JAJUJR000000000	SAMN23615063	bin122	Sedimentibacter sp.
GCA_029267515.1	JAJUIS000000000	SAMN23615038	bin96	Seleniivibrio woodruffii
GCA_029267765.1	JAJUHT000000000	SAMN23615013	bin71	Seleniivibrio woodruffii
GCA_029266035.1	JAJUFH000000000	SAMN23614949	bin6	Sinomicrobium sp.
GCA_029268145.1	JAJUHA000000000	SAMN23614994	bin52	Sphingomonadaceae bacterium
GCA_029265255.1	JAJUJQ000000000	SAMN23615062	bin121	Spirochaetota bacterium
GCA_029265035.1	JAJUKB000000000	SAMN23615073	bin132	Spirochaetota bacterium
GCA_029266095.1	JAJUFF000000000	SAMN23614947	bin4	Spirochaetota bacterium
GCA_029265755.1	JAJUGY000000000	SAMN23614992	bin50	Spirochaetota bacterium
GCA_029265615.1	JAJUIB000000000	SAMN23615021	bin79	Spirochaetota bacterium
GCA_029268245.1	JAJUGI000000000	SAMN23614976	bin33	Spirochaetota bacterium
GCA_029267955.1	JAJUHI000000000	SAMN23615002	bin60	Sporobacter termitidis
GCA_029265895.1	JAJUGO000000000	SAMN23614982	bin39	Sporomusaceae bacterium
GCA_029265905.1	JAJUGR000000000	SAMN23614985	bin42	Sporomusaceae bacterium
GCA_029267465.1	JAJUIT000000000	SAMN23615039	bin97	Synergistaceae bacterium
GCA_029265465.1	JAJUJG000000000	SAMN23615052	bin111	Thermobifida sp.
GCA_029265125.1	JAJUJX000000000	SAMN23615069	bin128	Tolumonas sp.
GCA_029267715.1	JAJUHX000000000	SAMN23615017	bin75	Wolinella succinogenes
GCA_029267665.1	JAJUIL000000000	SAMN23615031	bin89	bacterium
GCA_029267895.1	JAJUHN000000000	SAMN23615007	bin65	bacterium

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metagenome

a metagenome includes assembled sequences from hot spring and composting enrichment cultivation samples using lignin as substrate Metagenome

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