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Accession: PRJEB2057 ID: 203786

Epidemiology of tuberculosis

For further information on this study please see http://www.sanger.ac.uk/resources/downloads/bacteria/mycobacterium. More...
AccessionPRJEB2057
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 21-May-2013
Wellcome Sanger Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)145405
WGS master198
SRA Experiments157
Protein Sequences811958
Other datasets
BioSample201
Assembly198
Assembly details:
Assembly levelNumber of Assemblies
194
4
198
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001086845.1ScaffoldCQPS00000000SAMEA1706707
C09400866
GCA_001088145.1ScaffoldCQPZ00000000SAMEA1706701
E09700455
GCA_001093985.1ScaffoldCQPL00000000SAMEA1706687
E09701106
GCA_001108845.1ScaffoldCQPT00000000SAMEA1706661
C00401055
GCA_001105365.1ScaffoldCQPQ00000000SAMEA968074
B00001265
GCA_001116745.1ScaffoldCQQD00000000SAMEA968087
B09601851
GCA_001112945.1ScaffoldCQPV00000000SAMEA1706678
D00000071
GCA_001112865.1ScaffoldCQPP00000000SAMEA1706673
D00000538
GCA_001128725.1ScaffoldCQPU00000000SAMEA968216
B09701572
GCA_001133005.1ScaffoldCQQB00000000SAMEA968083
A00400885
GCA_001134885.1ScaffoldCQPX00000000SAMEA968161
A09900565
GCA_001164205.1ScaffoldCQSW00000000SAMEA968213
I09601853
GCA_001165085.1ScaffoldCQSK00000000SAMEA1706699
O09801359
GCA_001167185.1ScaffoldCQPM00000000SAMEA1706704
B00801080
GCA_001166845.1ScaffoldCQSI00000000SAMEA1706692
O09501089
GCA_001168405.1ScaffoldCQQC00000000SAMEA1706655
D00501624
GCA_001162825.1ScaffoldCQSD00000000SAMEA1706679
O09700920
GCA_001145965.1ScaffoldCQPW00000000SAMEA1706668
D00700688
GCA_001144065.1ScaffoldCQPR00000000SAMEA1706703
E09701191
GCA_001174865.1ScaffoldCQRU00000000SAMEA1706681
J09402203
GCA_001173265.1ScaffoldCQRL00000000SAMEA1706669
J09400698
GCA_001170265.1ScaffoldCQTV00000000SAMEA968203
S00600351
GCA_001169865.1ScaffoldCQQI00000000SAMEA968078
B09601926
GCA_001170685.1ScaffoldCQQA00000000SAMEA968086
A00500149
GCA_001191715.1ScaffoldCRZG00000000SAMEA968157
P00401210
GCA_001192435.1ScaffoldCRYT00000000SAMEA968179
N00500166
GCA_001192515.1ScaffoldCQTI00000000SAMEA968204
R09500614
GCA_001191955.1ScaffoldCRYZ00000000SAMEA968142
N00200616
GCA_001192575.1ScaffoldCQUB00000000SAMEA968177
M09500081
GCA_001193015.1ScaffoldCRZV00000000SAMEA968129
N09901607
GCA_001193195.1ScaffoldCQRZ00000000SAMEA1706663
J09701231
GCA_001193075.1ScaffoldCQTY00000000SAMEA968190
T09901127
GCA_001193955.1ScaffoldCQSG00000000SAMEA1706696
O00401640
GCA_001193775.1ScaffoldCQSY00000000SAMEA1706686
Q09600750
GCA_001194055.1ScaffoldCQRW00000000SAMEA1706672
J09500392
GCA_001197475.1ScaffoldCSAY00000000SAMEA968089
N09901774
GCA_001199055.1ScaffoldCSAV00000000SAMEA968097
N00000221
GCA_001197435.1ScaffoldCQSO00000000SAMEA1706689
P09501329
GCA_001197035.1ScaffoldCRZH00000000SAMEA968130
N00000064
GCA_001197095.1ScaffoldCQRK00000000SAMEA1706662
J09700140
GCA_001196935.1ScaffoldCSAD00000000SAMEA968091
G09801536
GCA_001196715.1ScaffoldCSAP00000000SAMEA968193
K09901972
GCA_001196835.1ScaffoldCRZX00000000SAMEA968156
SH1-874
GCA_001196225.1ScaffoldCQSX00000000SAMEA968123
W09900422
GCA_001196185.1ScaffoldCQUA00000000SAMEA968208
T09800928
GCA_001195965.1ScaffoldCQSB00000000SAMEA1706697
J09900583
GCA_001196335.1ScaffoldCQSL00000000SAMEA1706676
O09701563
GCA_001196315.1ScaffoldCSAG00000000SAMEA968154
I09400880
GCA_001196295.1ScaffoldCSAM00000000SAMEA968137
M09502139
GCA_001196635.1ScaffoldCRZT00000000SAMEA968127
N00800620
GCA_001195845.1ScaffoldCQUD00000000SAMEA968108
Y09400034
GCA_001195905.1ScaffoldCQSN00000000SAMEA1706690
O09501127
GCA_001195765.1ScaffoldCQSA00000000SAMEA1706706
J09800745
GCA_001195725.1ScaffoldCQSU00000000SAMEA1706675
P09701236
GCA_001195325.1ScaffoldCQTX00000000SAMEA968200
T09900050
GCA_001195685.1ScaffoldCRZF00000000SAMEA968155
SH5-875
GCA_001195665.1ScaffoldCQSR00000000SAMEA1706667
P00401720
GCA_001195645.1ScaffoldCQRN00000000SAMEA1706658
J09701920
GCA_001195185.1ScaffoldCRYA00000000SAMEA968144
N00701874
GCA_001194925.1ScaffoldCQTP00000000SAMEA968162
R09401256
GCA_001194365.1ScaffoldCRZK00000000SAMEA968186
G00000978
GCA_001194425.1ScaffoldCQTU00000000SAMEA968189
T09900518
GCA_001210665.1ScaffoldCQUF00000000SAMEA968080
Y00015898
GCA_001210545.1ScaffoldCQTT00000000SAMEA968197
R09500613
GCA_001210525.1ScaffoldCRZI00000000SAMEA968159
SAWC507
GCA_001210505.1ScaffoldCSAR00000000SAMEA968122
M09400328
GCA_001210825.1ScaffoldCRZO00000000SAMEA968131
N00400624
GCA_001211145.1ScaffoldCSAE00000000SAMEA968201
K00500041
GCA_001211205.1ScaffoldCQTN00000000SAMEA968163
R00301759
GCA_001211105.1ScaffoldCQTL00000000SAMEA968170
Q09901859
GCA_001209825.1ScaffoldCQUG00000000SAMEA968172
Z09901262
GCA_001209805.1ScaffoldCRZB00000000SAMEA968107
Q00501124
GCA_001209965.1ScaffoldCQSF00000000SAMEA1706693
J09900137
GCA_001209945.1ScaffoldCRZE00000000SAMEA968100
R09402296
GCA_001210125.1ScaffoldCQTW00000000SAMEA968079
Y00015573
GCA_001210105.1ScaffoldCRYY00000000SAMEA968118
EE0503811
GCA_001210305.1ScaffoldCQSS00000000SAMEA1706698
Q09900809
GCA_001210385.1ScaffoldCQSQ00000000SAMEA1706660
P09600222
GCA_001212345.1ScaffoldCRZN00000000SAMEA968188
EE0506178
GCA_001211765.1ScaffoldCRYO00000000SAMEA968145
N00500759
GCA_001211465.1ScaffoldCRZD00000000SAMEA968116
R09801836
GCA_001211425.1ScaffoldCQTZ00000000SAMEA968119
T09800777
GCA_001211605.1ScaffoldCRZP00000000SAMEA968114
V09501561
GCA_001211585.1ScaffoldCSAA00000000SAMEA968185
G00001233
GCA_001201935.1ScaffoldCRZS00000000SAMEA968109
X00800994
GCA_001201915.1ScaffoldCQRY00000000SAMEA1706709
J09800628
GCA_001201895.1ScaffoldCQSC00000000SAMEA1706680
O00100977
GCA_001201115.1ContigCRYW00000000SAMEA968147
N00800922
GCA_001201055.1ScaffoldCSAT00000000SAMEA968135
M09400937
GCA_001201495.1ScaffoldCSAF00000000SAMEA968195
K09700503
GCA_001201655.1ScaffoldCQUC00000000SAMEA968085
Y09500720
GCA_001203635.1ScaffoldCQTK00000000SAMEA968199
R00401166
GCA_001203995.1ScaffoldCSAC00000000SAMEA968182
H00200930
GCA_001203055.1ScaffoldCRYX00000000SAMEA968180
N09900855
GCA_001202715.1ScaffoldCQTB00000000SAMEA968082
K09901478
GCA_001202675.1ScaffoldCRYS00000000SAMEA968103
O00200127
GCA_001202835.1ScaffoldCSAS00000000SAMEA968207
L00401786
GCA_001202555.1ScaffoldCQRO00000000SAMEA1706705
J09800554
GCA_001202635.1ScaffoldCRZQ00000000SAMEA968093
F00001728
GCA_001201335.1ScaffoldCQRX00000000SAMEA1706677
J09602061
GCA_001200555.1ScaffoldCQTM00000000SAMEA968169
F00002017
GCA_001200495.1ScaffoldCQTS00000000SAMEA968192
R00018412
GCA_001200395.1ScaffoldCSAU00000000SAMEA968139
M00201208
GCA_001200255.1ScaffoldCSAK00000000SAMEA968148
K09900646
GCA_001199935.1ContigCSAW00000000SAMEA968166
N00000626
GCA_001200015.1ScaffoldCQUH00000000SAMEA968175
M09402043
GCA_001199275.1ScaffoldCRYU00000000SAMEA968146
N00401131
GCA_001198855.1ScaffoldCQTA00000000SAMEA968124
W09900434
GCA_001198575.1ScaffoldCRZY00000000SAMEA968094
F09900854
GCA_001198275.1ScaffoldCQST00000000SAMEA1706691
Q09900060
GCA_001197895.1ScaffoldCRZJ00000000SAMEA968132
N09900612
GCA_001197655.1ScaffoldCQTH00000000SAMEA968164
Q09901139
GCA_001197555.1ScaffoldCRZA00000000SAMEA968099
R09401899
GCA_001208765.1ScaffoldCRZR00000000SAMEA968110
W09900252
GCA_001208625.1ScaffoldCQTC00000000SAMEA968214
W09900442
GCA_001208685.1ScaffoldCSAO00000000SAMEA968206
L00201493
GCA_001208505.1ScaffoldCSAJ00000000SAMEA968136
M09401471
GCA_001208525.1ScaffoldCQSJ00000000SAMEA1706674
O09700898
GCA_001208465.1ScaffoldCQSP00000000SAMEA1706659
P09501583
GCA_001209145.1ScaffoldCQTJ00000000SAMEA968171
Q09901557
GCA_001209385.1ScaffoldCQSH00000000SAMEA1706666
O09401777
GCA_001209585.1ScaffoldCQTR00000000SAMEA968194
T09601545
GCA_001209445.1ScaffoldCRZC00000000SAMEA968106
Q09701888
GCA_001209665.1ScaffoldCQTF00000000SAMEA968098
I00300092
GCA_001207945.1ScaffoldCQSM00000000SAMEA1706708
P00301553
GCA_001208165.1ScaffoldCRZW00000000SAMEA968184
G00101715
GCA_001208125.1ScaffoldCSAB00000000SAMEA968092
F00201178
GCA_001207985.1ScaffoldCQUE00000000SAMEA968174
M00018020
GCA_001207015.1ScaffoldCSBI00000000SAMEA968165
N09901618
GCA_001206975.1ScaffoldCSAL00000000SAMEA968150
I00200020
GCA_001206955.1ScaffoldCQSE00000000SAMEA1706682
O09501596
GCA_001207075.1ScaffoldCQSZ00000000SAMEA968212
W09900423
GCA_001207715.1ScaffoldCSAN00000000SAMEA968205
K00500133
GCA_001207555.1ScaffoldCSAQ00000000SAMEA968191
K00201415
GCA_001207215.1ScaffoldCRZU00000000SAMEA968113
W09900339
GCA_001204175.1ScaffoldCQTG00000000SAMEA968076
I00601066
GCA_001204235.1ScaffoldCRZL00000000SAMEA968133
K00700186
GCA_001204895.1ScaffoldCQTQ00000000SAMEA968196
R09401839
GCA_001204615.1ScaffoldCSBK00000000SAMEA968217
N09902308
GCA_001204575.1ScaffoldCRZM00000000SAMEA968134
Z09600572
GCA_001204715.1ScaffoldCQRT00000000SAMEA1706654
J09701593
GCA_001204695.1ScaffoldCRYV00000000SAMEA968104
P09501258
GCA_001205115.1ScaffoldCQTO00000000SAMEA968168
R09601315
GCA_001204535.1ScaffoldCQRV00000000SAMEA1706683
J09500385
GCA_001206715.1ScaffoldCSAI00000000SAMEA968149
I09400970
GCA_001206155.1ScaffoldCQTD00000000SAMEA968081
X00800532
GCA_001205775.1ScaffoldCQSV00000000SAMEA1706684
Q09600228
GCA_001205215.1ScaffoldCQTE00000000SAMEA968077
I09800059
GCA_001205295.1ScaffoldCSAH00000000SAMEA968153
I09702330
GCA_001318085.1ScaffoldCHEC00000000SAMEA1706702
P09501076
GCA_001318065.1ScaffoldCGCX00000000SAMEA1706700
C09601061
GCA_001318045.1ScaffoldCGDC00000000SAMEA1706695
Q09900131
GCA_001318025.1ScaffoldCHZT00000000SAMEA1706694
J09902073
GCA_001318005.1ScaffoldCGCU00000000SAMEA1706688
J09900221
GCA_001317985.1ScaffoldCHZP00000000SAMEA1706685
J09401337
GCA_001317965.1ScaffoldCGCW00000000SAMEA1706671
A00401371
GCA_001317945.1ScaffoldCFLF00000000SAMEA1706670
O09801157
GCA_001317925.1ScaffoldCIFZ00000000SAMEA1706665
J09700837
GCA_001317905.1ScaffoldCGDE00000000SAMEA1706664
P09502221
GCA_001317885.1ScaffoldCGCZ00000000SAMEA1706657
P09501164
GCA_001317865.1ScaffoldCIJF00000000SAMEA1706656
P09501896
GCA_001319045.1ScaffoldCHEB00000000SAMEA968215
B00600458
GCA_001319025.1ScaffoldCGDN00000000SAMEA968211
M09400397
GCA_001319005.1ScaffoldCHKG00000000SAMEA968210
V09601310
GCA_001318985.1ScaffoldCFIN00000000SAMEA968209
M00102058
GCA_001318965.1ScaffoldCHKI00000000SAMEA968202
K00200539
GCA_001318945.1ScaffoldCIJO00000000SAMEA968198
K00101539
GCA_001318925.1ScaffoldCFOE00000000SAMEA968187
G09901357
GCA_001318905.1ScaffoldCFOH00000000SAMEA968183
H09601792
GCA_001318885.1ContigCGDP00000000SAMEA968181
N09901829
GCA_001318865.1ScaffoldCIGC00000000SAMEA968178
N09900805
GCA_001318845.1ScaffoldCGDL00000000SAMEA968176
M09400374
GCA_001318825.1ScaffoldCGDU00000000SAMEA968173
N00400960
GCA_001318565.1ScaffoldCGGO00000000SAMEA968120
T00200958
GCA_001318545.1ScaffoldCIAD00000000SAMEA968117
EE0506784
GCA_001318525.1ScaffoldCGDK00000000SAMEA968115
J09701362
GCA_001318505.1ScaffoldCFLG00000000SAMEA968112
S00600143
GCA_001318805.1ScaffoldCHED00000000SAMEA968167
N00001761
GCA_001318785.1ScaffoldCIAA00000000SAMEA968160
A00301419
GCA_001318765.1ScaffoldCGDG00000000SAMEA968158
A00400237
GCA_001318745.1ScaffoldCGDH00000000SAMEA968152
EE0502463
GCA_001318485.1ScaffoldCHZX00000000SAMEA968111
U09801187
GCA_001318465.1ScaffoldCHKJ00000000SAMEA968105
Q09802318
GCA_001318445.1ScaffoldCHKL00000000SAMEA968102
P00601463
GCA_001318425.1ScaffoldCHEE00000000SAMEA968096
E09701891
GCA_001318725.1ScaffoldCHKH00000000SAMEA968151
K09600911
GCA_001318705.1ScaffoldCGDJ00000000SAMEA968143
N00001996
GCA_001318685.1ScaffoldCIJI00000000SAMEA968141
N09501026
GCA_001318665.1ScaffoldCIGL00000000SAMEA968140
N00302086
GCA_001318645.1ContigCHZY00000000SAMEA968138
M00102039
GCA_001318625.1ScaffoldCGDF00000000SAMEA968128
N00501578
GCA_001318605.1ScaffoldCIKL00000000SAMEA968125
N00501741
GCA_001318585.1ScaffoldCFLH00000000SAMEA968121
U09801472
GCA_001318285.1ScaffoldCIAE00000000SAMEA968095
E09801032
GCA_001318145.1ScaffoldCHZS00000000SAMEA968088
A00401093
GCA_001318125.1ScaffoldCGCY00000000SAMEA968084
A09901284
GCA_001318105.1ScaffoldCGGP00000000SAMEA968075
I00300818
GCA_001318165.1ScaffoldCGDO00000000SAMEA968090
N09901297
SRA Data Details
ParameterValue
Data volume, Gbases122
Data volume, Mbytes86300

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