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Accession: PRJNA605977 ID: 605977

Citrobacter

Clinical and genomic epidemiology of carbapenem non-susceptible Citrobacter spp. at a tertiary healthcare center over two decades

Carbapenem-non-susceptible Citrobacter spp. (CNSC) have become increasingly recognized as healthcare-associated pathogens. More...

Accession	PRJNA605977
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Citrobacter[Taxonomy ID: 544] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter
Submission	Registration date: 12-Jun-2020 University of Pittsburgh School of Medicine
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	13
Other datasets
BioSample	13
Assembly	13

Assembly details:

Assembly level

Number of Assemblies

Contig

13
13

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_013336915.1		JAAMQE000000000	SAMN14082853	YDC697-2	Citrobacter farmeri
GCA_013336895.1		JAAMQG000000000	SAMN14082855	YDC876	Citrobacter freundii
GCA_013336855.1		JAAMQH000000000	SAMN14082856	YDC880	Citrobacter freundii
GCA_013336865.1		JAAMQF000000000	SAMN14082854	YDC849-1	Citrobacter freundii
GCA_013336995.1		JAAMPX000000000	SAMN14082846	RS259	Citrobacter freundii
GCA_013336955.1		JAAMQA000000000	SAMN14082849	YDC645	Citrobacter freundii
GCA_013336945.1		JAAMQB000000000	SAMN14082850	YDC661	Citrobacter freundii
GCA_013337065.1		JAAMPV000000000	SAMN14082844	RS77	Citrobacter freundii
GCA_013337015.1		JAAMPY000000000	SAMN14082847	YDC608	Citrobacter freundii
GCA_013360255.1		JAAMPW000000000	SAMN14082845	RS226	Citrobacter freundii
GCA_013368465.1		JAAMPZ000000000	SAMN14082848	YDC638-3	Citrobacter freundii
GCA_013336965.1		JAAMQC000000000	SAMN14082851	YDC667-1	Citrobacter werkmanii
GCA_013336845.1		JAAMQD000000000	SAMN14082852	YDC693	Citrobacter youngae

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BioProject Links for BioSample (Select 14082852) (1)
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Citrobacter
Citrobacter
Clinical and genomic epidemiology of carbapenem non-susceptible Citrobacter spp. at a tertiary healthcare center over two decades

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