Escherichia coli (ID 507915) - BioProject

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Accession: PRJNA507915 ID: 507915

Escherichia coli

carbapenemase-producing Escherichia coli among humans and their back-yard farm animals in Chinese rural villages

See Genome Information for Escherichia coli

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9329 additional projects are related by organism.

The rapid increasing of carbapenem-resistant Enterobacteriaceae (CRE) in both humans and animals pose a global threat to public health; however, the linkage of CRE between humans and animals has not been identified. More...

Accession	PRJNA507915
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Publications	Li J et al., "Inter-host Transmission of Carbapenemase-Producing Escherichia coli among Humans and Backyard Animals.", Environ Health Perspect, 2019 Oct;127(10):107009
Grants	"SRC" (Grant ID D0879801, the Swedish Research Council) "NSFC" (Grant ID 31370076, the National Natural Science Foundation of China) "NSFC" (Grant ID 81361138021, the National Natural Science Foundation of China) "NSFC" (Grant ID 81661138002, the National Natural Science Foundation of China) "national key R&D plan" (Grant ID 2018YFD0500300, National Key Research and Development Program of China)
Submission	Registration date: 30-Oct-2019 College of Veterinary Medicine,China Agricultural University
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	88
Publications
PubMed	1
PMC	1
Other datasets
BioSample	88
Assembly	88

Assembly details:

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Assembly level

Number of Assemblies

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Contig

Total

81
7
88

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_009394675.1	RYEL00000000	SAMN10516530	B029ch	Escherichia coli
GCA_009394625.1	RYEJ00000000	SAMN10516551	B011h	Escherichia coli
GCA_009394605.1	RYEK00000000	SAMN10516550	A045h	Escherichia coli
GCA_009394585.1	RYEH00000000	SAMN10516553	B053h	Escherichia coli
GCA_009394595.1	RYEI00000000	SAMN10516552	B031h	Escherichia coli
GCA_009394575.1	RYEG00000000	SAMN10516555	C047h	Escherichia coli
GCA_009394535.1	RYED00000000	SAMN10516560	G009h	Escherichia coli
GCA_009394525.1	RYEF00000000	SAMN10516556	D016h	Escherichia coli
GCA_009394515.1	RYEE00000000	SAMN10516557	E007h	Escherichia coli
GCA_009394485.1	RYEC00000000	SAMN10516564	H045h	Escherichia coli
GCA_009394465.1	RYEB00000000	SAMN10516566	L054h	Escherichia coli
GCA_009394445.1	RYEA00000000	SAMN10516579	D026p	Escherichia coli
GCA_009394435.1	RYDZ00000000	SAMN10516580	E024p1	Escherichia coli
GCA_009394405.1	RYDY00000000	SAMN10516583	E040p	Escherichia coli
GCA_009394395.1	RYDX00000000	SAMN10516590	G006p1	Escherichia coli
GCA_009394375.1	RYDW00000000	SAMN10516603	H022p	Escherichia coli
GCA_009394345.1	RYCR00000000	SAMN10516525	A043ch	Escherichia coli
GCA_009394315.1	RYCS00000000	SAMN10516524	A025ch	Escherichia coli
GCA_009394305.1	RYCT00000000	SAMN10516523	F012ca	Escherichia coli
GCA_009394295.1	RYCQ00000000	SAMN10516526	A054ch	Escherichia coli
GCA_009394275.1	RYCP00000000	SAMN10516527	B011ch	Escherichia coli
GCA_009394235.1	RYCO00000000	SAMN10516528	B019ch	Escherichia coli
GCA_009394205.1	RYCM00000000	SAMN10516531	B062ch	Escherichia coli
GCA_009394225.1	RYCN00000000	SAMN10516529	B024ch	Escherichia coli
GCA_009394195.1	RYCL00000000	SAMN10516532	D054ch	Escherichia coli
GCA_009394175.1	RYCI00000000	SAMN10516535	J037ch	Escherichia coli
GCA_009394145.1	RYCK00000000	SAMN10516533	F054ch	Escherichia coli
GCA_009394135.1	RYCJ00000000	SAMN10516534	I027ch	Escherichia coli
GCA_009394115.1	RYCH00000000	SAMN10516536	A016d	Escherichia coli
GCA_009394065.1	RYCG00000000	SAMN10516537	B019d	Escherichia coli
GCA_009394055.1	RYCF00000000	SAMN10516538	A016f	Escherichia coli
GCA_009394045.1	RYCE00000000	SAMN10516539	B030f	Escherichia coli
GCA_009394035.1	RYCD00000000	SAMN10516540	B042f	Escherichia coli
GCA_009394015.1	RYCC00000000	SAMN10516541	C008f	Escherichia coli
GCA_009393965.1	RYBZ00000000	SAMN10516544	E009f	Escherichia coli
GCA_009393955.1	RYCB00000000	SAMN10516542	C035f	Escherichia coli
GCA_009393945.1	RYCA00000000	SAMN10516543	D038f	Escherichia coli
GCA_009393935.1	RYBY00000000	SAMN10516545	E025f	Escherichia coli
GCA_009393915.1	RYBX00000000	SAMN10516546	E059f	Escherichia coli
GCA_009393895.1	RYBV00000000	SAMN10516548	G029f	Escherichia coli
GCA_009393855.1	RYBW00000000	SAMN10516547	F004f	Escherichia coli
GCA_009393845.1	RYBU00000000	SAMN10516549	I025f	Escherichia coli
GCA_009393835.1	RYBT00000000	SAMN10516554	B062h	Escherichia coli
GCA_009393815.1	RYBS00000000	SAMN10516558	E038h	Escherichia coli
GCA_009393765.1	RYBQ00000000	SAMN10516561	G018h	Escherichia coli
GCA_009393755.1	RYBP00000000	SAMN10516562	G028h	Escherichia coli
GCA_009393745.1	RYBR00000000	SAMN10516559	F071h	Escherichia coli
GCA_009393735.1	RYBO00000000	SAMN10516563	G039h	Escherichia coli
GCA_009393715.1	RYBN00000000	SAMN10516565	K025h	Escherichia coli
GCA_009393665.1	RYBM00000000	SAMN10516567	A043p1	Escherichia coli
GCA_009393645.1	RYBK00000000	SAMN10516569	A053p	Escherichia coli
GCA_009393655.1	RYBL00000000	SAMN10516568	A043p2	Escherichia coli
GCA_009393635.1	RYBJ00000000	SAMN10516570	A062p	Escherichia coli
GCA_009393615.1	RYBI00000000	SAMN10516571	B010p	Escherichia coli
GCA_009393595.1	RYBF00000000	SAMN10516574	C013p	Escherichia coli
GCA_009393555.1	RYBG00000000	SAMN10516573	B013p2	Escherichia coli
GCA_009393565.1	RYBE00000000	SAMN10516575	C017p	Escherichia coli
GCA_009393525.1	RYBC00000000	SAMN10516577	D008p	Escherichia coli
GCA_009393515.1	RYBD00000000	SAMN10516576	C023p	Escherichia coli
GCA_009393485.1	RYBB00000000	SAMN10516578	D010p	Escherichia coli
GCA_009393475.1	RYBA00000000	SAMN10516581	E024p2	Escherichia coli
GCA_009393445.1	RYAY00000000	SAMN10516584	F037p1	Escherichia coli
GCA_009393425.1	RYAZ00000000	SAMN10516582	E036p	Escherichia coli
GCA_009393415.1	RYAX00000000	SAMN10516585	F037p2	Escherichia coli
GCA_009393395.1	RYAW00000000	SAMN10516586	F056p	Escherichia coli
GCA_009393365.1	RYAV00000000	SAMN10516587	F060p	Escherichia coli
GCA_009393345.1	RYAU00000000	SAMN10516588	G003p	Escherichia coli
GCA_009393335.1	RYAC00000000	SAMN10516608	L001p	Escherichia coli
GCA_009393315.1	RYAT00000000	SAMN10516589	G005p	Escherichia coli
GCA_009393295.1	RYAS00000000	SAMN10516591	G006p2	Escherichia coli
GCA_009393275.1	RYAR00000000	SAMN10516592	G007p	Escherichia coli
GCA_009393255.1	RYAQ00000000	SAMN10516593	G008p	Escherichia coli
GCA_009393225.1	RYAP00000000	SAMN10516594	G009p1	Escherichia coli
GCA_009393205.1	RYAN00000000	SAMN10516596	G017p	Escherichia coli
GCA_009393195.1	RYAO00000000	SAMN10516595	G009p2	Escherichia coli
GCA_009393175.1	RYAM00000000	SAMN10516597	G029p	Escherichia coli
GCA_009393145.1	RYAJ00000000	SAMN10516600	G047p	Escherichia coli
GCA_009393125.1	RYAI00000000	SAMN10516601	G049p	Escherichia coli
GCA_009393115.1	RYAK00000000	SAMN10516599	G041p	Escherichia coli
GCA_009393035.1	RYAD00000000	SAMN10516607	J041p	Escherichia coli
GCA_009393075.1	RYAG00000000	SAMN10516604	H058p	Escherichia coli
GCA_009393065.1	RYAE00000000	SAMN10516606	J034p	Escherichia coli
GCA_009393045.1	RYAH00000000	SAMN10516602	H001p	Escherichia coli
GCA_009392975.1	RYAA00000000	SAMN10516610	L057p	Escherichia coli
GCA_009392945.1	RYAL00000000	SAMN10516598	G031p	Escherichia coli
GCA_009392965.1	RYAB00000000	SAMN10516609	L020p	Escherichia coli
GCA_009392935.1	RYAF00000000	SAMN10516605	I003p	Escherichia coli
GCA_009455525.1	RYBH00000000	SAMN10516572	B013p1	Escherichia coli

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Escherichia coli

carbapenemase-producing Escherichia coli among humans and their back-yard farm animals in Chinese rural villages

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