The genome of the F1 male progeny (isolate LxT-3; BioSample SAMN17054328) of a cross between a female Panthera tigris (isolate Pti1; BioSample SAMN17054330) and male Panthera leo (isolate Ple1; BioSample SAMN17054329) was sequenced, and the maternal (PRJNA684344) and paternal (PRJNA684340) pseudohaplotype assemblies were generated.
| Accession | PRJNA747255 |
| Type | Umbrella project |
| Submission | Registration date: 16-Jul-2021
Texas A&M University |
| Relevance | Evolution |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 139086 |
| WGS master | 2 |
| Transcript | 138881 |
| SRA Experiments | 3 |
| Protein Sequences | 108969 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 3 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes |
4
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA684340 | Chromosomes | Panthera leo | Panthera leo - paternal haplotype of Liger F1 hybrid (LxT-3) (Texas A&M University) | | PRJNA751610 | Chromosomes | Panthera leo | Panthera leo - paternal haplotype of Liger F1 hybrid (LxT-3) (NCBI) | | PRJNA684344 | Chromosomes | Panthera tigris | Panthera tigris - maternal haplotype of Liger F1 hybrid (LxT-3) (Texas A&M University) | | PRJNA751894 | Chromosomes | Panthera tigris | Panthera tigris RefSeq project - maternal haplotype of Liger F1 hybrid (LxT-3) (NCBI) |
|