The food and water safety pilot project is a comprehensive strategy that integrates multidisciplinary components from diverse federal science sources to address two main goals. The first is to enhance food and water safety by developing genomics-based methods for pathogen isolation, detection and characterisation. The second goal is to develop a federally integrated system to manage, store and provide open access to genomic data related to food and water borne pathogens. The model organisms for this study are Shiga-toxin Producing Escherchia coli (STEC) and Salmonella Enteritidis from Environmental, animal husbandry, food samples, and medical isolates.
| Accession | PRJNA299001 |
| Type | Umbrella project |
| Grants | - "Strengthening Food and Water Safety in Canada Through an Integrated Federal Genomics Initiative" (Grant ID GRDI-FWS, Government of Canada)
|
| Submission | Registration date: 16-Oct-2015
Food and Water Safety Consortium- National Microbiology Laboratory
|
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 55366 |
| WGS master | 360 |
| Genomic DNA | 34 |
| SRA Experiments | 419 |
| Protein Sequences | 1861185 |
| Other datasets |
| BioSample | 411 |
| Assembly | 371 |
This project encompasses the following sub-project:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Complete genome |
1
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA287560 | Complete genome | Bacteria | Food and Water Safety consortium (Food and Water Safety Consortium) |
|