This is a phased haploid assembly of the Thoroughbred horse dam and the donkey sire haplotype from a mule.
| Accession | PRJNA1136960 |
| Type | Umbrella project |
| Organism | Equus caballus x Equus asinus[Taxonomy ID: 1050200] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus intersubgeneric hybrids; Equus caballus x Equus asinus |
| Grants | - "Long-read assembly and annotation of rat genomes that are important models of complex genetic disease" (Grant ID R01 HG011252, National Human Genome Research Institute)
|
| Submission | Registration date: 17-Jul-2024
University of Kentucky |
| Relevance | Agricultural |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 215989 |
| WGS master | 2 |
| Transcript | 214388 |
| SRA Experiments | 28 |
| Protein Sequences | 173107 |
| Publications |
| PubMed | 3 |
| Other datasets |
| BioSample | 31 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes |
3
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA1135234 | Chromosomes | Equus | Equus caballus/Equus assinus Assembly (University of Kentucky) | | PRJNA1135235 | Chromosomes | Equus caballus | Equus caballus isolate:M_4285 | breed:Thoroughbred Genome sequencing (University of Kentucky) | | PRJNA1194615 | Chromosomes | Equus caballus | Equus caballus isolate:M_4285 | breed:Thoroughbred RefSeq Genome sequencing and assembly (NCBI) |
|
RefSeq assemblyHighest level of assembly : Chromosomes |
1
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA1198117 | Chromosomes | Equus asinus | Equus caballus/Equus assinus RefSeq BioProject (NCBI) |
|