BioProject accession | Assembly level | Name | Title |
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PRJEB40874 | Contigs | EMG produced TPA metagenomics assembly of PRJEB14491 data set (metagenomic Shotgun analysis of cecum microbiome of poultry). | EMG produced TPA metagenomics assembly of PRJEB14491 data set (metagenomic Shotgun analysis of cecum microbiome of poultry). (EMG) | PRJEB41356 | Contigs | EMG produced TPA metagenomics assembly of PRJEB22062 data set (As part of the EFFORT project, we sampled feces from pig and poultry livestock in nine European countries (BE, BG, DK, FR, ES, GE, NL, PL, SP). More than 9000 animals were sampled, across 181 pig and 178 poultry herds to generate herd-level composite fecal samples. Using shotgun metagenomics, we have quantified and characterized the antimicrobial resistance gene pools (resistomes) in Europe’s two most intensively raised livestock species.). | EMG produced TPA metagenomics assembly of PRJEB22062 data set (As part of the EFFORT project, we sampled feces from pig and poultry livestock in nine European countries (BE, BG, DK, FR, ES, GE, NL, PL, SP). More than 9000 animals were sampled, across 181 pig and 178 poultry herds to generate herd-level composite fecal samples. Using shotgun metagenomics, we have quantified and characterized the antimicrobial resistance gene pools (resistomes) in Europe’s two most intensively raised livestock species.). (EMG) | PRJEB41355 | Contigs | EMG produced TPA metagenomics assembly of PRJNA193217 data set (Chicken cecal contents Metagenome). | EMG produced TPA metagenomics assembly of PRJNA193217 data set (Chicken cecal contents Metagenome). (EMG) | PRJEB55374 | Contigs | HoloFood Chicken Caecum MAG catalogue | HoloFood Chicken Caecum MAG catalogue (UNIVERSITY OF COPENHAGEN) | PRJEB55375 | Contigs | HoloFood Chicken Ileum MAG catalogue | HoloFood Chicken Ileum MAG catalogue (UNIVERSITY OF COPENHAGEN) | List all 6 'Genome sequencing' projects...BioProject accession | Assembly level | Name | Title |
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PRJEB40874 | Contigs | EMG produced TPA metagenomics assembly of PRJEB14491 data set (metagenomic Shotgun analysis of cecum microbiome of poultry). | EMG produced TPA metagenomics assembly of PRJEB14491 data set (metagenomic Shotgun analysis of cecum microbiome of poultry). (EMG) | PRJEB41356 | Contigs | EMG produced TPA metagenomics assembly of PRJEB22062 data set (As part of the EFFORT project, we sampled feces from pig and poultry livestock in nine European countries (BE, BG, DK, FR, ES, GE, NL, PL, SP). More than 9000 animals were sampled, across 181 pig and 178 poultry herds to generate herd-level composite fecal samples. Using shotgun metagenomics, we have quantified and characterized the antimicrobial resistance gene pools (resistomes) in Europe’s two most intensively raised livestock species.). | EMG produced TPA metagenomics assembly of PRJEB22062 data set (As part of the EFFORT project, we sampled feces from pig and poultry livestock in nine European countries (BE, BG, DK, FR, ES, GE, NL, PL, SP). More than 9000 animals were sampled, across 181 pig and 178 poultry herds to generate herd-level composite fecal samples. Using shotgun metagenomics, we have quantified and characterized the antimicrobial resistance gene pools (resistomes) in Europe’s two most intensively raised livestock species.). (EMG) | PRJEB41355 | Contigs | EMG produced TPA metagenomics assembly of PRJNA193217 data set (Chicken cecal contents Metagenome). | EMG produced TPA metagenomics assembly of PRJNA193217 data set (Chicken cecal contents Metagenome). (EMG) | PRJEB55374 | Contigs | HoloFood Chicken Caecum MAG catalogue | HoloFood Chicken Caecum MAG catalogue (UNIVERSITY OF COPENHAGEN) | PRJEB55375 | Contigs | HoloFood Chicken Ileum MAG catalogue | HoloFood Chicken Ileum MAG catalogue (UNIVERSITY OF COPENHAGEN) | PRJEB55376 | Contigs | HoloFood Salmon Gut MAG catalogue | HoloFood Salmon Gut MAG catalogue (UNIVERSITY OF COPENHAGEN) | Less... |