Leptospira interrogans (ID 257237) - BioProject

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Accession: PRJNA257237 ID: 257237

Leptospira interrogans

Leptospira interrogans Genome sequencing and assembly

See Genome Information for Leptospira interrogans

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312 additional projects are related by organism.

we re-sequenced 62 genomes of Leptospira interrogans from global sources

Accession	PRJNA257237
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Leptospira interrogans[Taxonomy ID: 173] Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira; Leptospira interrogans
Publications	Xu Y et al., "Whole genome sequencing revealed host adaptation-focused genomic plasticity of pathogenic Leptospira.", Sci Rep, 2016 Feb 2;6:20020
Submission	Registration date: 24-Feb-2016 Chinese National Human Genome Center at Shanghai
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	19774
WGS master	62
SRA Experiments	63
Publications
PubMed	1
PMC	1
Other datasets
BioSample	62
Assembly	62

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

62
62

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_001568285.1	JQQR00000000	SAMN02949564	56606-V	Leptospira interrogans
GCA_001568265.1	JQQQ00000000	SAMN02949526	56606	Leptospira interrogans
GCA_001568215.1	JQQN00000000	SAMN02949563	56601-V	Leptospira interrogans
GCA_001568205.1	JQQL00000000	SAMN02949520	56201	Leptospira interrogans
GCA_001568225.1	JQQP00000000	SAMN02949524	56605	Leptospira interrogans
GCA_001568175.1	JQQK00000000	SAMN02949518	56143	Leptospira interrogans
GCA_001568155.1	JQQG00000000	SAMN02949514	56129	Leptospira interrogans
GCA_001568135.1	JQQF00000000	SAMN02949513	56126	Leptospira interrogans
GCA_001568125.1	JQQE00000000	SAMN02949512	56121	Leptospira interrogans
GCA_001568105.1	JQQD00000000	SAMN02949511	56104	Leptospira interrogans
GCA_001568065.1	JQPY00000000	SAMN02949556	56656	Leptospira interrogans
GCA_001568075.1	JQQC00000000	SAMN02947972	56101	Leptospira interrogans
GCA_001568045.1	JQPW00000000	SAMN02949554	56652	Leptospira interrogans
GCA_001568025.1	JQPT00000000	SAMN02949570	56647	Leptospira interrogans
GCA_001567985.1	JQPS00000000	SAMN02949548	56642	Leptospira interrogans
GCA_001567975.1	JQPQ00000000	SAMN02949546	56638	Leptospira interrogans
GCA_001567965.1	JQPP00000000	SAMN02949545	56635	Leptospira interrogans
GCA_001567945.1	JQPN00000000	SAMN02949543	56630	Leptospira interrogans
GCA_001567905.1	JQPK00000000	SAMN02949540	56627	Leptospira interrogans
GCA_001567895.1	JQPJ00000000	SAMN02949539	56626	Leptospira interrogans
GCA_001567885.1	JQPE00000000	SAMN02949533	56618	Leptospira interrogans
GCA_001567835.1	JQPD00000000	SAMN02949532	56612	Leptospira interrogans
GCA_001567805.1	JQPB00000000	SAMN02949578	J50	Leptospira interrogans
GCA_001567825.1	JQOY00000000	SAMN02949574	G32	Leptospira interrogans
GCA_001567815.1	JQPC00000000	SAMN02947765	20046	Leptospira interrogans
GCA_001567785.1	JQOW00000000	SAMN02949572	CMCC-3	Leptospira interrogans
GCA_001567745.1	JQOT00000000	SAMN02949568	CMCC-1	Leptospira interrogans
GCA_001567725.1	JQOQ00000000	SAMN02949561	200040	Leptospira interrogans
GCA_001567735.1	JQOR00000000	SAMN02949562	200509	Leptospira interrogans
GCA_001567705.1	JQOP00000000	SAMN02947410	56678	Leptospira interrogans
GCA_001567675.1	JQON00000000	SAMN02949559	56666	Leptospira interrogans
GCA_001567655.1	JQOO00000000	SAMN02949560	56673	Leptospira interrogans
GCA_001567645.1	JQOL00000000	SAMN02949576	H78Shuang4	Leptospira interrogans
GCA_001569125.1	JQQW00000000	SAMN02949530	56610	Leptospira interrogans
GCA_001569105.1	JQQV00000000	SAMN02949566	56609-V	Leptospira interrogans
GCA_001569075.1	JQQU00000000	SAMN02949529	56609	Leptospira interrogans
GCA_001569065.1	JQQT00000000	SAMN02949527	56608	Leptospira interrogans
GCA_001569045.1	JQQS00000000	SAMN02949565	56608-V	Leptospira interrogans
GCA_001569005.1	JQQM00000000	SAMN02949521	56601	Leptospira interrogans
GCA_001568995.1	JQQO00000000	SAMN02949523	56603	Leptospira interrogans
GCA_001568985.1	JQQJ00000000	SAMN02949517	56137	Leptospira interrogans
GCA_001568965.1	JQQI00000000	SAMN02949516	56135	Leptospira interrogans
GCA_001568935.1	JQQH00000000	SAMN02949515	56133	Leptospira interrogans
GCA_001568885.1	JQPZ00000000	SAMN02949557	56660	Leptospira interrogans
GCA_001568855.1	JQPV00000000	SAMN02949549	56651	Leptospira interrogans
GCA_001568845.1	JQPX00000000	SAMN02949555	56653	Leptospira interrogans
GCA_001568815.1	JQPU00000000	SAMN02949571	56649	Leptospira interrogans
GCA_001568805.1	JQPR00000000	SAMN02949547	56639	Leptospira interrogans
GCA_001568775.1	JQPO00000000	SAMN02949544	56634	Leptospira interrogans
GCA_001568765.1	JQPM00000000	SAMN02949542	56629	Leptospira interrogans
GCA_001568735.1	JQPL00000000	SAMN02949541	56628	Leptospira interrogans
GCA_001568725.1	JQPI00000000	SAMN02949538	56625	Leptospira interrogans
GCA_001568695.1	JQPH00000000	SAMN02949537	56624	Leptospira interrogans
GCA_001568685.1	JQPG00000000	SAMN02949536	56620	Leptospira interrogans
GCA_001568655.1	JQPF00000000	SAMN02949535	56619	Leptospira interrogans
GCA_001568645.1	JQPA00000000	SAMN02949579	J9	Leptospira interrogans
GCA_001568615.1	JQOZ00000000	SAMN02949577	J42	Leptospira interrogans
GCA_001568605.1	JQOX00000000	SAMN02949573	G30	Leptospira interrogans
GCA_001568575.1	JQOV00000000	SAMN02949575	H30H0728	Leptospira interrogans
GCA_001568565.1	JQOU00000000	SAMN02949569	CMCC-2	Leptospira interrogans
GCA_001568525.1	JQOM00000000	SAMN02949558	56662	Leptospira interrogans
GCA_001568535.1	JQOS00000000	SAMN02949567	A05D31	Leptospira interrogans

SRA Data Details

Parameter	Value
Data volume, Gbases	69
Data volume, Mbytes	44567

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Leptospira interrogans Genome sequencing and assembly

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