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Accession: PRJDB7389 ID: 974592

Escherichia coli

Whole genome sequencing analysis of EHEC O76

See Genome Information for Escherichia coli
Draft and compelete genome sequence analyses were performed in enterohemorrhagic Escherichia coli serogroup O76 isolated in Japan.
AccessionPRJDB7389
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
SubmissionRegistration date: 19-May-2023
Department of Bacteriology, National Institute of Infectious Diseases
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)5753
WGS master37
Genomic DNA3
SRA Experiments37
Protein Sequences5185
Other datasets
BioSample38
Assembly38
Assembly details:
Assembly levelNumber of Assemblies
1
37
38
AssemblyLevelWGSChrsBioSampleInfraspecies IdTaxonomy
GCA_036984745.1ContigBRWK00000000
SAMD00513714
JNE162448
GCA_036984725.1ContigBRWJ00000000
SAMD00513713
JNE162447
GCA_036984705.1ContigBRWI00000000
SAMD00513712
JNE162446
GCA_036984965.1ContigBRWV00000000
SAMD00513725
JNE190246
GCA_036984945.1ContigBRWU00000000
SAMD00513724
JNE182207
GCA_036984805.1ContigBRWN00000000
SAMD00513717
JNE170683
GCA_036984785.1ContigBRWM00000000
SAMD00513716
JNE170161
GCA_036984765.1ContigBRWL00000000
SAMD00513715
JNE162449
GCA_036985125.1ContigBRXD00000000
SAMD00513733
JNE210376
GCA_036984985.1ContigBRWW00000000
SAMD00513726
JNE192016
GCA_036985105.1ContigBRXC00000000
SAMD00513732
JNE210139
GCA_036985085.1ContigBRXB00000000
SAMD00513731
JNE202211
GCA_036985065.1ContigBRXA00000000
SAMD00513730
JNE201222
GCA_036985045.1ContigBRWZ00000000
SAMD00513729
JNE201042
GCA_036985025.1ContigBRWY00000000
SAMD00513728
JNE200650
GCA_036985005.1ContigBRWX00000000
SAMD00513727
JNE200285
GCA_036984925.1ContigBRWT00000000
SAMD00513723
JNE182206
GCA_036984905.1ContigBRWS00000000
SAMD00513722
JNE181590
GCA_036984885.1ContigBRWR00000000
SAMD00513721
JNE180162
GCA_036984865.1ContigBRWQ00000000
SAMD00513720
JNE173189
GCA_036984845.1ContigBRWP00000000
SAMD00513719
JNE171429
GCA_036984825.1ContigBRWO00000000
SAMD00513718
JNE170927
GCA_036984465.1ContigBRVW00000000
SAMD00513700
JNE100447
GCA_036984525.1ContigBRVZ00000000
SAMD00513703
JNE110351
GCA_036984445.1ContigBRVV00000000
SAMD00513699
JNE092069
GCA_036984425.1ContigBRVU00000000
SAMD00513698
JNE081186
GCA_036984405.1ContigBRVT00000000
SAMD00513697
JNE071635
GCA_036984505.1ContigBRVY00000000
SAMD00513702
JNE101101
GCA_036984485.1ContigBRVX00000000
SAMD00513701
JNE100914
GCA_036984545.1ContigBRWA00000000
SAMD00513704
JNE132785
GCA_036984685.1ContigBRWH00000000
SAMD00513711
JNE161642
GCA_036984665.1ContigBRWG00000000
SAMD00513710
JNE160955
GCA_036984645.1ContigBRWF00000000
SAMD00513709
JNE160432
GCA_036984625.1ContigBRWE00000000
SAMD00513708
JNE152536
GCA_036984605.1ContigBRWD00000000
SAMD00513707
JNE152531
GCA_036984585.1ContigBRWC00000000
SAMD00513706
JNE132847
GCA_036984565.1ContigBRWB00000000
SAMD00513705
JNE132810
GCA_030297395.1Complete genomeSAMD00608481
JNE132847
SRA Data Details
ParameterValue
Data volume, Gbases17
Data volume, Mbytes8801

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