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BioProject

Organizing biological data

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Items: 17

Select item 9796171.

German-wide interlaboratory study of 2021/22 on whole-genome short-read sequencing of microbial pathogens

Impact of wet-lab protocols on the quality of whole-genome short-read sequences from foodborne microbial pathogens

: Project data type: Other

Scope:: Monoisolate

FEDERAL INSTITUTE FOR RISK ASSESSMENT (BFR)

Accession:: PRJEB62505
ID:: 979617

Select item 8912852.

Salmonella outbreak investigation

: Project data type: Raw sequence reads

Scope:: Multispecies

UNIVERSITY OF THE BASQUE COUNTRY UPV/EHU UPV/EHU

Accession:: PRJNA891285
ID:: 891285

Select item 5635683.

Collaboration CCUG - Chun Lab

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

University of Gothenburg - CCUG

Accession:: PRJNA563568
ID:: 563568

Select item 5438154.

Salmonella species

Diverse Salmonella Sequences for WGS Serotyping

: Project data type: Raw sequence reads

Scope:: Multispecies

Ceneters for Disease Control and Prevention

Accession:: PRJNA543815
ID:: 543815

Select item 5309505.

Salmonella enterica isolates from animal production, food and the environment in Germany

Whole-genome sequence data for Salmonella enterica isolated from animal production, food and the environment and derived from routine diagnostics, monitoring and control programs at the German National Reference Laboratory for Salmonella (German Federal Institute for Risk Assessment (BfR)).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

FEDERAL INSTITUTE FOR RISK ASSESSMENT (BFR)

Accession:: PRJEB31846
ID:: 530950

Select item 4381016.

Engage project for collaboration in next generation sequencing

: Project data type: Other

Scope:: Monoisolate

APHA

Accession:: PRJEB24308
ID:: 438101

Select item 2870407.

The Epigenomic Landscape of Prokaryotes

: Project data type: Epigenomics

Scope:: Multispecies

Rubin / Pennacchio, Genomics Division, Lawrence Berkeley National Laboratory

Accession:: PRJNA287040
ID:: 287040

Select item 2704788.

Investigation_of_temporo_spatial_and_carriage_invasion_relationships_between_isolates_of_Salmonella_Typhimurium_from_a_well_described_paediatric_cohort_in_Malawi

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB6652
ID:: 270478

Select item 2519239.

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB6403
ID:: 251923

Select item 22411610.

Refseq Prokaryotic Genome Annotation Project

: Project data type: RefSeq Other

Scope:: Multispecies

NCBI

Accession:: PRJNA224116
ID:: 224116

Select item 19168711.

Salmonella enterica subsp. arizonae str. CFSAN000561

Foodborne Pathogen Survey

Taxonomy:: Salmonella enterica subsp. arizonae str. CFSAN000561

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

FDA

Accession:: PRJNA191687
ID:: 191687

Select item 19168612.

Salmonella enterica subsp. arizonae str. CFSAN000560

Foodborne Pathogen Survey

Taxonomy:: Salmonella enterica subsp. arizonae str. CFSAN000560

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

FDA

Accession:: PRJNA191686
ID:: 191686

Select item 17761413.

Salmonella enterica subsp. arizonae serovar 63:g,z51:- str. So 20/20

Salmonella enterica subsp. arizonae serovar 63:g,z51:- Genome Sequencing

Taxonomy:: Salmonella enterica subsp. arizonae serovar 63:g,z51:- str. So 20/20

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Laboratory for Foodborne Zoonoses

Accession:: PRJNA177614
ID:: 177614

Select item 17761314.

Salmonella enterica subsp. arizonae serovar 53:-:- str. SA20100345

Salmonella enterica subsp. arizonae serovar 53:-:- str. SA20100345 Genome sequencing

Taxonomy:: Salmonella enterica subsp. arizonae serovar 53:-:- str. SA20100345

: Project data type: Genome sequencing

Scope:: Monoisolate

Laboratory for Foodborne Zoonoses

Accession:: PRJNA177613
ID:: 177613

Select item 17761215.

Salmonella enterica subsp. arizonae serovar 62:z36:- str. 5335/86

Salmonella enterica subsp. arizonae serovar 62:z36:- str. 5335/86 Genome sequencing and assembly

Taxonomy:: Salmonella enterica subsp. arizonae serovar 62:z36:- str. 5335/86

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Laboratory for Foodborne Zoonoses

Accession:: PRJNA177612
ID:: 177612

Select item 16128516.

Salmonella enterica subsp. arizonae serovar 41:z4,z23:- str. 01-0089

Foodborne Pathgen Survey

Taxonomy:: Salmonella enterica subsp. arizonae serovar 41:z4,z23:- str. 01-0089

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

FDA

Accession:: PRJNA161285
ID:: 161285

Select item 2877117.

Salmonella enterica subsp. arizonae serovar 41:z4,z23:- str. ATCC BAA-1577

Subspecies IIIa strain for comparative analysis

Taxonomy:: Salmonella enterica subsp. arizonae serovar 41:z4,z23:- str. ATCC BAA-1577

: Project data type: Genome sequencing

Scope:: Monoisolate

Washington University Genome Sequencing Center

Accession:: PRJNA28771
ID:: 28771

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