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Genome Information for Cyclura pinguis
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Stout iguana (Cyclura pinguis) is a critically endangered species of lizard of the genus Cyclura belonging to the family Iguanidae. The species can be found exclusively in Anegada and Guana islands of the British Virgin Islands. Historically, it inhabited the islands of Puerto Rico and Saint Thomas; however, the animal's original range has been greatly diminished over prehistory (from Wikipedia). This sample was collected from an adult male born in the San Diego Zoo, coordinated by Oliver Ryder and Cynthia Steiner, and used to create at high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis, with funding support from HHMI.
Accession | PRJNA986166 |
Type | Umbrella project |
Organism | Cyclura pinguis[Taxonomy ID: 118683] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Iguanidae; Iguaninae; Cyclura; Cyclura pinguis |
Submission | Registration date: 21-Jun-2023 Vertebrate Genomes Project |
Relevance | Reference genome |
Project Data:
Resource Name | Number of Links |
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Sequence data |
Nucleotide (total) | 21 |
WGS master | 2 |
SRA Experiments | 17 |
Publications |
PubMed | 1 |
PMC | 1 |
Other datasets |
BioSample | 1 |
Assembly | 2 |
This project encompasses the following 3 sub-projects:
Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds SRA or Trace Total | 1 1 1 3
|
BioProject accession | Assembly level | Name | Title |
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PRJNA973807 | Chromosomes | Cyclura pinguis | Cyclura pinguis (stout iguana) genome, rCycPin1, haplotype 2 (Vertebrate Genomes Project) | PRJNA973804 | Scaffolds | Cyclura pinguis | Cyclura pinguis (stout iguana) genome, rCycPin1, haplotype 1 (Vertebrate Genomes Project) | PRJNA1144525 | SRA or Trace | Cyclura pinguis (stout iguana) genome, rCycPin1, sequence data | Cyclura pinguis (stout iguana) genome, rCycPin1, sequence data (Vertebrate Genomes Project) |
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