See
Genome Information for Phoxinus phoxinus
Navigate Up
Navigate Across
This project collects the sequencing data and assemblies generated for Phoxinus phoxinus, common name Eurasian minnow, to facilitate genome assembly and annotation as part of the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The data under this project are made available subject to the Darwin Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
| Accession | PRJEB59308 |
| Type | Umbrella project |
| Organism | Phoxinus phoxinus[Taxonomy ID: 58324] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Phoxininae; Phoxinus; Phoxinus phoxinus |
| Submission | Registration date: 28-Jan-2023
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 28 |
| WGS master | 2 |
| Genomic DNA | 26 |
| SRA Experiments | 8 |
| Other datasets |
| BioSample | 8 |
| Assembly | 2 |
fPhoPho encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEB59820 | Chromosomes | Phoxinus phoxinus | Phoxinus phoxinus (Eurasian minnow) genome assembly, fPhoPho1 (WELLCOME SANGER INSTITUTE) | | PRJEB59821 | Scaffolds | Phoxinus phoxinus | Phoxinus phoxinus (Eurasian minnow) genome assembly, fPhoPho1, alternate haplotype (WELLCOME SANGER INSTITUTE) |
|
| Other | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJEB59307 | Phoxinus phoxinus | Phoxinus phoxinus (Eurasian minnow), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) |
|