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Accession: PRJNA925464 ID: 925464

Sequencing of Clinical NTM Strains

Clinical isolates of non-tuberculosis Mycobacteria (NTM) were sequenced and analyzed with a specific interest in their prophage content.

Accession	PRJNA925464
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Amarh ED et al., "Unusual prophages in Mycobacterium abscessus genomes and strain variations in phage susceptibilities.", PLoS One, 2023;18(2):e0281769
Submission	Registration date: 19-Jan-2023 University of Pittsburgh
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	19
WGS master	11
Genomic DNA	8
Protein Sequences	776
Publications
PubMed	1
PMC	1
Other datasets
BioSample	11
Assembly	19

Assembly details:

Assembly level

Number of Assemblies

Contig

11
11

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_028210905.1		JAQLTM000000000	SAMN32794258	BWH-A	Mycobacteroides abscessus subsp. abscessus
GCA_028210895.1		JAQLTN000000000	SAMN32794257	T56R	Mycobacteroides abscessus subsp. abscessus
GCA_028210935.1		JAQLTT000000000	SAMN32794251	T44	Mycobacteroides abscessus subsp. abscessus
GCA_028210875.1		JAQLTU000000000	SAMN32794250	T38	Mycobacteroides abscessus subsp. massiliense
GCA_028210975.1		JAQLTL000000000	SAMN32794259	BWH-C	Mycobacteroides abscessus subsp. abscessus
GCA_028211145.1		JAQLTS000000000	SAMN32794252	T46	Mycobacteroides abscessus subsp. abscessus
GCA_028211135.1		JAQLTR000000000	SAMN32794253	T48	Mycobacteroides abscessus subsp. massiliense
GCA_028211045.1		JAQLTG000000000	SAMN32794260	BWH-D	Mycobacteroides abscessus subsp. massiliense
GCA_028211035.1		JAQLTO000000000	SAMN32794256	T56S	Mycobacteroides abscessus subsp. abscessus
GCA_028211075.1		JAQLTP000000000	SAMN32794255	T52	Mycobacteroides abscessus subsp. massiliense
GCA_028211195.1		JAQLTQ000000000	SAMN32794254	T49	Mycobacteroides abscessus subsp. massiliense

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