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Accession: PRJNA924056 ID: 924056

Bacterial isolates possessing the blaIMP-4 carbapenemase gene - genome sequencing and assembly

Bacterial isolates possessing the blaIMP-4 carbapenemase gene - genome sequencing and assembly
AccessionPRJNA924056
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsMacesic N et al., "Genomic dissection of endemic carbapenem resistance reveals metallo-beta-lactamase dissemination through clonal, plasmid and integron transfer.", Nat Commun, 2023 Aug 8;14(1):4764
SubmissionRegistration date: 15-Jan-2023
Monash University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)238
WGS master232
Genomic DNA6
SRA Experiments378
Protein Sequences37001
Publications
PubMed1
PMC1
Other datasets
BioSample238
Assembly238
Assembly details:
Assembly levelNumber of Assemblies
6
232
238
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_030183195.2ContigJARTMM000000000
SAMN32721380
CPO519
GCA_030187175.2ContigJARTTQ000000000
SAMN32721536
CPO064
GCA_030186825.2ContigJARTSS000000000
SAMN32721489
CPO117
GCA_030187555.2ContigJARTUK000000000
SAMN32721455
CPO010
GCA_030184715.2ContigJARTPK000000000
SAMN32721416
CPO302
GCA_030187025.2ContigJARTTI000000000
SAMN32721437
CPO076
GCA_030185045.2ContigJARTQB000000000
SAMN32721423
CPO260
GCA_030184215.2ContigJARTOL000000000
SAMN32721404
CPO371
GCA_030183605.2ContigJARTNG000000000
SAMN32721468
CPO482
GCA_030185855.2ContigJARTRN000000000
SAMN32721394
CPO179
GCA_030185345.2ContigJARTQQ000000000
SAMN32721430
CPO239
GCA_030183515.2ContigJARTNC000000000
SAMN32721386
CPO492
GCA_030184935.2ContigJARTPV000000000
SAMN32721518
CPO272
GCA_030184615.2ContigJARTPG000000000
SAMN32721414
CPO320
GCA_030185115.2ContigJARTQD000000000
SAMN32721424
CPO256
GCA_030184345.2ContigJARTOS000000000
SAMN32721473
CPO361
GCA_030184535.2ContigJARTPB000000000
SAMN32721411
CPO335
GCA_030184555.2ContigJARTPA000000000
SAMN32721552
CPO337
GCA_030184095.2ContigJARTOE000000000
SAMN32721501
CPO395
GCA_030183495.2ContigJARTNB000000000
SAMN32721385
CPO493
GCA_030183715.2ContigJARTNK000000000
SAMN32721387
CPO474
GCA_030185135.2ContigJARTQE000000000
SAMN32721425
CPO255
GCA_030185835.2ContigJARTRO000000000
SAMN32721395
CPO177
GCA_030186075.2ContigJARTSB000000000
SAMN32721363
CPO153
GCA_030186105.2ContigJARTRZ000000000
SAMN32721526
CPO157
GCA_030185955.2ContigJARTRV000000000
SAMN32721396
CPO165
GCA_030186375.2ContigJARTSQ000000000
SAMN32721569
CPO123
GCA_030186955.2ContigJARTTF000000000
SAMN32721575
CPO081
GCA_030186475.2ContigJARTTD000000000
SAMN32721573
CPO093
GCA_030186935.2ContigJARTTC000000000
SAMN32721435
CPO098
GCA_030186035.2ContigJARTRY000000000
SAMN32721525
CPO158
GCA_030187615.2ContigJARTUM000000000
SAMN32721495
CPO006
GCA_030186015.2ContigJARTRX000000000
SAMN32721524
CPO160
GCA_030185415.2ContigJARTQS000000000
SAMN32721432
CPO234
GCA_030184115.2ContigJARTOG000000000
SAMN32721402
CPO386
GCA_030187515.2ContigJARTUI000000000
SAMN32721454
CPO013
GCA_030187205.2ContigJARTTR000000000
SAMN32721442
CPO056
GCA_030187085.2ContigJARTTP000000000
SAMN32721577
CPO067
GCA_030187275.2ContigJARTTT000000000
SAMN32721444
CPO053
GCA_030187575.2ContigJARTUJ000000000
SAMN32721494
CPO011
GCA_030187455.2ContigJARTUF000000000
SAMN32721452
CPO020
GCA_030182795.2ContigJARTLU000000000
SAMN32721509
CPO552
GCA_030183135.2ContigJARTMK000000000
SAMN32721378
CPO521
GCA_030182925.2ContigJARTLZ000000000
SAMN32721461
CPO542
GCA_030182875.2ContigJARTLY000000000
SAMN32721376
CPO543
GCA_030182975.2ContigJARTMA000000000
SAMN32721377
CPO540
GCA_030187075.1ContigJARTTL000000000
SAMN32721438
CPO073
GCA_030185735.1ContigJARTRD000000000
SAMN32721361
CPO189
GCA_030185685.1ContigJARTRC000000000
SAMN32721560
CPO190
GCA_030185595.1ContigJARTRB000000000
SAMN32721559
CPO191
GCA_030185575.1ContigJARTQZ000000000
SAMN32721519
CPO210
GCA_030185555.1ContigJARTRA000000000
SAMN32721558
CPO203
GCA_030185535.1ContigJARTQY000000000
SAMN32721360
CPO214
GCA_030185505.1ContigJARTQX000000000
SAMN32721434
CPO216
GCA_030185495.1ContigJARTQW000000000
SAMN32721557
CPO220
GCA_030185435.1ContigJARTQT000000000
SAMN32721433
CPO229
GCA_030185395.1ContigJARTQO000000000
SAMN32721428
CPO241
GCA_030185315.1ContigJARTQL000000000
SAMN32721357
CPO244
GCA_030185275.1ContigJARTQN000000000
SAMN32721484
CPO242
GCA_030185255.1ContigJARTQK000000000
SAMN32721482
CPO248
GCA_030185205.1ContigJARTQI000000000
SAMN32721556
CPO250
GCA_030185155.1ContigJARTQH000000000
SAMN32721426
CPO251
GCA_030185075.1ContigJARTQC000000000
SAMN32721480
CPO259
GCA_030184995.1ContigJARTPX000000000
SAMN32721420
CPO264
GCA_030184965.1ContigJARTPW000000000
SAMN32721555
CPO267
GCA_030184945.1ContigJARTPP000000000
SAMN32721418
CPO287
GCA_030184915.1ContigJARTPU000000000
SAMN32721419
CPO278
GCA_030184895.1ContigJARTPT000000000
SAMN32721478
CPO280
GCA_030184875.1ContigJARTPR000000000
SAMN32721554
CPO285
GCA_030184835.1ContigJARTPQ000000000
SAMN32721355
CPO286
GCA_030184815.1ContigJARTPO000000000
SAMN32721553
CPO291
GCA_030184785.1ContigJARTPM000000000
SAMN32721476
CPO298
GCA_030184775.1ContigJARTPN000000000
SAMN32721477
CPO292
GCA_030184415.1ContigJARTOT000000000
SAMN32721408
CPO360
GCA_030184395.1ContigJARTOR000000000
SAMN32721352
CPO362
GCA_030184375.1ContigJARTOP000000000
SAMN32721551
CPO367
GCA_030184335.1ContigJARTOQ000000000
SAMN32721407
CPO365
GCA_030184295.1ContigJARTOO000000000
SAMN32721406
CPO368
GCA_030184275.1ContigJARTON000000000
SAMN32721405
CPO369
GCA_030184255.1ContigJARTOM000000000
SAMN32721351
CPO370
GCA_030184515.1ContigJARTOY000000000
SAMN32721353
CPO344
GCA_030184495.1ContigJARTOZ000000000
SAMN32721354
CPO338
GCA_030184475.1ContigJARTOW000000000
SAMN32721391
CPO353
GCA_030184155.1ContigJARTOH000000000
SAMN32721403
CPO385
GCA_030184135.1ContigJARTOF000000000
SAMN32721350
CPO389
GCA_030184055.1ContigJARTOC000000000
SAMN32721550
CPO400
GCA_030184655.1ContigJARTPJ000000000
SAMN32721415
CPO303
GCA_030184635.1ContigJARTPH000000000
SAMN32721475
CPO312
GCA_030183575.1ContigJARTNA000000000
SAMN32721384
CPO494
GCA_030187235.1ContigJARTTS000000000
SAMN32721443
CPO054
GCA_030187195.1ContigJARTTU000000000
SAMN32721445
CPO050
GCA_030187655.1ContigJARTUO000000000
SAMN32721458
CPO003
GCA_030187635.1ContigJARTUP000000000
SAMN32721538
CPO002
GCA_030187595.1ContigJARTUL000000000
SAMN32721456
CPO008
GCA_030187475.1ContigJARTUG000000000
SAMN32721453
CPO016
GCA_030187485.1ContigJARTUH000000000
SAMN32721493
CPO014
GCA_030187395.1ContigJARTUB000000000
SAMN32721448
CPO024
GCA_030187405.1ContigJARTUD000000000
SAMN32721450
CPO022
GCA_030187355.1ContigJARTUA000000000
SAMN32721537
CPO033
GCA_030182905.2ContigJARTLV000000000
SAMN32721344
CPO547
GCA_030183145.2ContigJARTMH000000000
SAMN32721542
CPO526
GCA_030183245.2ContigJARTML000000000
SAMN32721379
CPO520
GCA_030183535.2ContigJARTND000000000
SAMN32721466
CPO491
GCA_030183275.2ContigJARTMO000000000
SAMN32721381
CPO513
GCA_030187525.2ContigJARTUC000000000
SAMN32721449
CPO023
GCA_030187255.2ContigJARTTV000000000
SAMN32721446
CPO046
GCA_030187035.2ContigJARTTK000000000
SAMN32721535
CPO074
GCA_030185175.2ContigJARTQF000000000
SAMN32721356
CPO254
GCA_030183635.2ContigJARTNH000000000
SAMN32721543
CPO478
GCA_030184315.2ContigJARTOV000000000
SAMN32721410
CPO355
GCA_030185015.2ContigJARTPY000000000
SAMN32721479
CPO263
GCA_030185365.2ContigJARTQR000000000
SAMN32721431
CPO235
GCA_030187725.1ContigJARTUN000000000
SAMN32721457
CPO004
GCA_030183875.2ContigJARTNT000000000
SAMN32721547
CPO429
GCA_030187295.2ContigJARTTW000000000
SAMN32721447
CPO045
GCA_030185035.2ContigJARTPZ000000000
SAMN32721421
CPO262
GCA_030185295.2ContigJARTQM000000000
SAMN32721483
CPO243
GCA_030185235.2ContigJARTQJ000000000
SAMN32721427
CPO249
GCA_030186985.2ContigJARTTH000000000
SAMN32721576
CPO078
GCA_030186415.2ContigJARTSR000000000
SAMN32721365
CPO120
GCA_030183005.2ContigJARTMD000000000
SAMN32721510
CPO534
GCA_030183075.2ContigJARTMC000000000
SAMN32721463
CPO537
GCA_030182785.2ContigJARTLT000000000
SAMN32721373
CPO554
GCA_030182885.2ContigJARTLW000000000
SAMN32721374
CPO546
GCA_030186855.2ContigJARTSM000000000
SAMN32721567
CPO136
GCA_030186235.2ContigJARTSJ000000000
SAMN32721401
CPO140
GCA_030186425.2ContigJARTSV000000000
SAMN32721366
CPO106
GCA_030185465.2ContigJARTQU000000000
SAMN32721358
CPO224
GCA_030185615.2ContigJARTRE000000000
SAMN32721392
CPO188
GCA_030185455.2ContigJARTQV000000000
SAMN32721359
CPO221
GCA_030186155.2ContigJARTSD000000000
SAMN32721399
CPO150
GCA_030185065.2ContigJARTQA000000000
SAMN32721422
CPO261
GCA_030184435.2ContigJARTOU000000000
SAMN32721409
CPO356
GCA_030183795.2ContigJARTNP000000000
SAMN32721470
CPO463
GCA_030183755.2ContigJARTNO000000000
SAMN32721469
CPO465
GCA_030183655.2ContigJARTNI000000000
SAMN32721544
CPO477
GCA_030183425.2ContigJARTMZ000000000
SAMN32721383
CPO495
GCA_030183545.2ContigJARTNE000000000
SAMN32721467
CPO487
GCA_030183455.2ContigJARTMY000000000
SAMN32721347
CPO496
GCA_030183345.2ContigJARTMU000000000
SAMN32721346
CPO504
GCA_030186975.2ContigJARTTG000000000
SAMN32721436
CPO079
GCA_030169065.1Complete genomeSAMN32721532
CPO109
GCA_030186795.1ContigJARTSP000000000
SAMN32721530
CPO128
GCA_030183695.2ContigJARTNL000000000
SAMN32721545
CPO471
GCA_030184665.2ContigJARTPF000000000
SAMN32721413
CPO321
GCA_030184575.2ContigJARTPC000000000
SAMN32721474
CPO328
GCA_030184755.2ContigJARTPL000000000
SAMN32721417
CPO301
GCA_030248925.2ContigJARTUQ000000000
SAMN32721570
CPO112
GCA_030187125.2ContigJARTTN000000000
SAMN32721440
CPO071
GCA_030186995.2ContigJARTTJ000000000
SAMN32721534
CPO075
GCA_030187435.2ContigJARTUE000000000
SAMN32721451
CPO021
GCA_030183355.2Complete genomeSAMN32721511
CPO506
GCA_030183855.2Complete genomeSAMN32721349
CPO459
GCA_030185815.2Complete genomeSAMN32721562
CPO180
GCA_030185915.2Complete genomeSAMN32721487
CPO174
GCA_030186885.2Complete genomeSAMN32721492
CPO100
GCA_030186385.2ContigJARTST000000000
SAMN32721531
CPO111
GCA_030186915.2ContigJARTTE000000000
SAMN32721574
CPO086
GCA_030186335.2ContigJARTSN000000000
SAMN32721568
CPO134
GCA_030186295.2ContigJARTSL000000000
SAMN32721566
CPO137
GCA_030186195.2ContigJARTSF000000000
SAMN32721565
CPO147
GCA_030185965.2ContigJARTRT000000000
SAMN32721580
CPO170
GCA_030182735.2ContigJARTLQ000000000
SAMN32721372
CPO566
GCA_030182955.2ContigJARTLX000000000
SAMN32721375
CPO545
GCA_030182805.1ContigJARTLP000000000
SAMN32721371
CPO570
GCA_030183445.1ContigJARTMW000000000
SAMN32721512
CPO500
GCA_030183415.1ContigJARTMX000000000
SAMN32721497
CPO497
GCA_030183745.1ContigJARTNN000000000
SAMN32721514
CPO469
GCA_030183735.1ContigJARTNM000000000
SAMN32721579
CPO470
GCA_030183595.1ContigJARTNF000000000
SAMN32721513
CPO486
GCA_030183335.1ContigJARTMV000000000
SAMN32721369
CPO503
GCA_030183315.1ContigJARTMR000000000
SAMN32721541
CPO509
GCA_030183295.1ContigJARTMQ000000000
SAMN32721578
CPO510
GCA_030183235.1ContigJARTMP000000000
SAMN32721496
CPO512
GCA_030183215.1ContigJARTMN000000000
SAMN32721368
CPO514
GCA_030183175.1ContigJARTMJ000000000
SAMN32721345
CPO522
GCA_030183115.1ContigJARTMI000000000
SAMN32721540
CPO523
GCA_030183055.1ContigJARTMG000000000
SAMN32721539
CPO528
GCA_030183065.1ContigJARTME000000000
SAMN32721464
CPO532
GCA_030185655.1ContigJARTRG000000000
SAMN32721520
CPO186
GCA_030185635.1ContigJARTRF000000000
SAMN32721485
CPO187
GCA_030185715.1ContigJARTRI000000000
SAMN32721393
CPO184
GCA_030186875.1ContigJARTSY000000000
SAMN32721571
CPO103
GCA_030185895.1ContigJARTRQ000000000
SAMN32721362
CPO175
GCA_030185775.1ContigJARTRL000000000
SAMN32721561
CPO181
GCA_030186505.1ContigJARTSZ000000000
SAMN32721572
CPO102
GCA_030183955.2ContigJARTNX000000000
SAMN32721500
CPO410
GCA_030183895.2ContigJARTNU000000000
SAMN32721389
CPO422
GCA_030184015.2ContigJARTOA000000000
SAMN32721472
CPO402
GCA_030183915.2ContigJARTNV000000000
SAMN32721498
CPO417
GCA_030183675.2ContigJARTNJ000000000
SAMN32721348
CPO475
GCA_030183835.2ContigJARTNS000000000
SAMN32721546
CPO458
GCA_030184855.2ContigJARTPS000000000
SAMN32721505
CPO284
GCA_030183985.2ContigJARTNZ000000000
SAMN32721548
CPO403
GCA_030184225.2ContigJARTOK000000000
SAMN32721504
CPO373
GCA_030184075.2ContigJARTOD000000000
SAMN32721390
CPO397
GCA_030184035.2ContigJARTOB000000000
SAMN32721549
CPO401
GCA_030185925.2ContigJARTRS000000000
SAMN32721488
CPO173
GCA_030185865.2ContigJARTRP000000000
SAMN32721523
CPO176
GCA_030185975.2ContigJARTRU000000000
SAMN32721563
CPO167
GCA_030186095.2ContigJARTRW000000000
SAMN32721397
CPO163
GCA_030186165.2ContigJARTSE000000000
SAMN32721370
CPO149
GCA_030186135.2ContigJARTSC000000000
SAMN32721398
CPO151
GCA_030186055.2ContigJARTSA000000000
SAMN32721564
CPO156
GCA_030185755.2ContigJARTRJ000000000
SAMN32721486
CPO183
GCA_030185675.2ContigJARTRH000000000
SAMN32721521
CPO185
GCA_030185795.2ContigJARTRK000000000
SAMN32721522
CPO182
GCA_030185195.2ContigJARTQG000000000
SAMN32721481
CPO253
GCA_030186435.2ContigJARTSU000000000
SAMN32721533
CPO107
GCA_030186285.2ContigJARTSK000000000
SAMN32721528
CPO139
GCA_030186345.2ContigJARTSO000000000
SAMN32721529
CPO132
GCA_030186255.2ContigJARTSI000000000
SAMN32721364
CPO141
GCA_030186275.2ContigJARTSH000000000
SAMN32721400
CPO142
GCA_030186595.2ContigJARTTA000000000
SAMN32721491
CPO101
GCA_030186495.2ContigJARTSW000000000
SAMN32721367
CPO105
GCA_030186815.2ContigJARTSX000000000
SAMN32721490
CPO104
GCA_030187375.2ContigJARTTZ000000000
SAMN32721508
CPO037
GCA_030182775.1ContigJARTLS000000000
SAMN32721460
CPO555
GCA_030182705.1ContigJARTLO000000000
SAMN32721459
CPO573
GCA_030185335.1ContigJARTQP000000000
SAMN32721429
CPO240
GCA_030184735.1ContigJARTPE000000000
SAMN32721412
CPO323
GCA_030184675.1ContigJARTPI000000000
SAMN32721517
CPO305
GCA_030183035.1ContigJARTMF000000000
SAMN32721465
CPO529
GCA_030182995.1ContigJARTMB000000000
SAMN32721462
CPO538
GCA_030182815.1ContigJARTLR000000000
SAMN32721343
CPO563
GCA_030184595.1ContigJARTPD000000000
SAMN32721516
CPO324
GCA_030183325.1ContigJARTMT000000000
SAMN32721382
CPO505
GCA_030183975.1ContigJARTNY000000000
SAMN32721471
CPO405
GCA_030183935.1ContigJARTNW000000000
SAMN32721499
CPO411
GCA_030183815.1ContigJARTNQ000000000
SAMN32721388
CPO460
GCA_030184445.1ContigJARTOX000000000
SAMN32721515
CPO347
GCA_030184195.1ContigJARTOJ000000000
SAMN32721503
CPO377
GCA_030184165.1ContigJARTOI000000000
SAMN32721502
CPO382
GCA_030186205.1ContigJARTSG000000000
SAMN32721527
CPO143
GCA_030187135.1ContigJARTTM000000000
SAMN32721439
CPO072
GCA_030187115.1ContigJARTTO000000000
SAMN32721441
CPO069
GCA_030187335.1ContigJARTTY000000000
SAMN32721507
CPO038
GCA_030187305.1ContigJARTTX000000000
SAMN32721506
CPO039
SRA Data Details
ParameterValue
Data volume, Gbases210
Data volume, Tbytes0.10

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