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Accession: PRJNA773815 ID: 773815

Within-host evolution of MRSA during persistent bacteremia

The goal of this study was to find genetic loci in MRSA subject to convergent evolution across independent infections
AccessionPRJNA773815
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 22-Oct-2021
University of Pittsburgh
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)20
WGS master19
Genomic DNA1
SRA Experiments206
Protein Sequences2710
Other datasets
BioSample206
Assembly20
Assembly details:
Assembly levelNumber of Assemblies
1
19
20
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_021869805.1Complete genomeSAMN22513885
Patient 14, Isolate 02
GCA_021852925.1ContigJAJHOK000000000
SAMN22513757
Patient 02, Isolate 10
GCA_021852995.1ContigJAJHOJ000000000
SAMN22513734
Patient 01, Isolate 02
GCA_021852885.1ContigJAJHOL000000000
SAMN22513770
Patient 03, Isolate 12
GCA_021852845.1ContigJAJHOM000000000
SAMN22513776
Patient 04, Isolate 01
GCA_021852775.1ContigJAJHON000000000
SAMN22513795
Patient 05, Isolate 06
GCA_021852765.1ContigJAJHOO000000000
SAMN22513802
Patient 06, Isolate 01
GCA_021852725.1ContigJAJHOP000000000
SAMN22513816
Patient 07, Isolate 05
GCA_021852705.1ContigJAJHOR000000000
SAMN22513827
Patient 09, Isolate 01
GCA_021852665.1ContigJAJHOQ000000000
SAMN22513823
Patient 08, Isolate 02
GCA_021852645.1ContigJAJHOS000000000
SAMN22513842
Patient 10, Isolate 05
GCA_021852625.1ContigJAJHOT000000000
SAMN22513851
Patient 11, Isolate 03
GCA_021852585.1ContigJAJHOU000000000
SAMN22513859
Patient 12, Isolate 01
GCA_021852535.1ContigJAJHOV000000000
SAMN22513880
Patient 13, Isolate 13
GCA_021852555.1ContigJAJHOW000000000
SAMN22513894
Patient 15, Isolate 01
GCA_021852525.1ContigJAJHOX000000000
SAMN22513910
Patient 16, Isolate 02
GCA_021852505.1ContigJAJHOY000000000
SAMN22513921
Patient 17, Isolate 04
GCA_021852485.1ContigJAJHOZ000000000
SAMN22513927
Patient 18, Isolate 04
GCA_021852465.1ContigJAJHPA000000000
SAMN22513928
Patient 19, Isolate 01
GCA_021852445.1ContigJAJHPB000000000
SAMN22513937
Patient 20, Isolate 03
SRA Data Details
ParameterValue
Data volume, Gbases113
Data volume, Mbytes53595

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