U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA764050 ID: 764050

Multiple

E. coli and KESC group 3GCRE/CRE from hospital wastewater Genome sequencing and assembly

E. coli, C. freundii, K. pneumoniae, K. oxytoca, S. marcescens and E. cloacae complex isolates from hospital wastewater were isolated and sequenced by whole genome sequencing to determine different strains and resistance genes.
AccessionPRJNA764050
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 17-Sep-2021
University Medical Center Hamburg Eppendorf
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)240
Other datasets
BioSample240
Assembly240
Assembly details:
Assembly levelNumber of Assemblies
199
41
240
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_022542405.1ScaffoldJAKVYV000000000SAMN21467563
AGK0881
GCA_022543455.1ContigJAKWAS000000000SAMN21467565
AGK0495
GCA_022543405.1ScaffoldJAKWAR000000000SAMN21467566
AGK0496
GCA_022543395.1ContigJAKWAP000000000SAMN21467568
AGK0503
GCA_022543355.1ScaffoldJAKWAN000000000SAMN21467570
AGK0517
GCA_022543375.1ContigJAKWAQ000000000SAMN21467567
AGK0497
GCA_022543335.1ContigJAKWAO000000000SAMN21467569
AGK0514
GCA_022543315.1ScaffoldJAKWAM000000000SAMN21467571
AGK0521
GCA_022543295.1ContigJAKWAL000000000SAMN21467572
AGK0533
GCA_022543275.1ContigJAKWAK000000000SAMN21467573
AGK0534
GCA_022543255.1ScaffoldJAKWAI000000000SAMN21467523
AGK0611
GCA_022543235.1ScaffoldJAKWAJ000000000SAMN21467522
AGK0566
GCA_022543215.1ScaffoldJAKWAG000000000SAMN21467525
AGK0622
GCA_022543195.1ScaffoldJAKWAF000000000SAMN21467526
AGK0626
GCA_022543175.1ScaffoldJAKWAH000000000SAMN21467524
AGK0612
GCA_022543145.1ScaffoldJAKWAD000000000SAMN21467529
AGK0843
GCA_022543135.1ScaffoldJAKWAE000000000SAMN21467528
AGK0668
GCA_022543115.1ScaffoldJAKWAC000000000SAMN21467530
AGK0844
GCA_022543095.1ScaffoldJAKWAB000000000SAMN21467531
AGK0845
GCA_022543075.1ContigJAKWAA000000000SAMN21467532
AGK0846
GCA_022543045.1ScaffoldJAKVZY000000000SAMN21467534
AGK0848
GCA_022543035.1ContigJAKVZZ000000000SAMN21467533
AGK0847
GCA_022542995.1ScaffoldJAKVZV000000000SAMN21467537
AGK0851
GCA_022543005.1ScaffoldJAKVZX000000000SAMN21467535
AGK0849
GCA_022542975.1ScaffoldJAKVZW000000000SAMN21467536
AGK0850
GCA_022542945.1ScaffoldJAKVZU000000000SAMN21467538
AGK0852
GCA_022542915.1ScaffoldJAKVZT000000000SAMN21467539
AGK0853
GCA_022542935.1ScaffoldJAKVZS000000000SAMN21467540
AGK0854
GCA_022542875.1ScaffoldJAKVZR000000000SAMN21467541
AGK0855
GCA_022542855.1ScaffoldJAKVZN000000000SAMN21467545
AGK0859
GCA_022542885.1ScaffoldJAKVZQ000000000SAMN21467542
AGK0856
GCA_022542805.1ScaffoldJAKVZM000000000SAMN21467546
AGK0862
GCA_022542795.1ScaffoldJAKVZP000000000SAMN21467543
AGK0857
GCA_022542775.1ScaffoldJAKVZL000000000SAMN21467547
AGK0863
GCA_022542815.1ScaffoldJAKVZO000000000SAMN21467544
AGK0858
GCA_022542755.1ScaffoldJAKVZJ000000000SAMN21467549
AGK0867
GCA_022542715.1ScaffoldJAKVZI000000000SAMN21467550
AGK0868
GCA_022542735.1ScaffoldJAKVZK000000000SAMN21467548
AGK0864
GCA_022542695.1ScaffoldJAKVZH000000000SAMN21467551
AGK0869
GCA_022542615.1ScaffoldJAKVZD000000000SAMN21467555
AGK0873
GCA_022542675.1ScaffoldJAKVZG000000000SAMN21467552
AGK0870
GCA_022542655.1ScaffoldJAKVZF000000000SAMN21467553
AGK0871
GCA_022542635.1ScaffoldJAKVZE000000000SAMN21467554
AGK0872
GCA_022542575.1ScaffoldJAKVZB000000000SAMN21467557
AGK0875
GCA_022542555.1ScaffoldJAKVYZ000000000SAMN21467559
AGK0877
GCA_022542535.1ScaffoldJAKVZA000000000SAMN21467558
AGK0876
GCA_022542595.1ScaffoldJAKVZC000000000SAMN21467556
AGK0874
GCA_022542495.1ScaffoldJAKVYW000000000SAMN21467562
AGK0880
GCA_022542485.1ScaffoldJAKVYY000000000SAMN21467560
AGK0878
GCA_022542475.1ScaffoldJAKVYX000000000SAMN21467561
AGK0879
GCA_022542455.1ScaffoldJAKVYU000000000SAMN21467564
AGK0882
GCA_022543895.1ScaffoldJAKWHP000000000SAMN21467527
AGK0629
GCA_022543875.1ContigJAKWHS000000000SAMN21467645
AGK0783
GCA_022543885.1ScaffoldJAKWHV000000000SAMN21467642
AGK0759
GCA_022544075.1ScaffoldJAKWID000000000SAMN21467634
AGK0665
GCA_022544045.1ScaffoldJAKWHY000000000SAMN21467639
AGK0736
GCA_022544025.1ScaffoldJAKWIB000000000SAMN21467636
AGK0732
GCA_022543995.1ScaffoldJAKWIA000000000SAMN21467637
AGK0734
GCA_022543985.1ContigJAKWHX000000000SAMN21467640
AGK0737
GCA_022543975.1ScaffoldJAKWHZ000000000SAMN21467638
AGK0735
GCA_022543955.1ContigJAKWHW000000000SAMN21467641
AGK0739
GCA_022543915.1ScaffoldJAKWHU000000000SAMN21467643
AGK0778
GCA_022543435.1ScaffoldJAKWHR000000000SAMN21467646
AGK0784
GCA_022543515.1ContigJAKWHT000000000SAMN21467644
AGK0782
GCA_022543445.1ScaffoldJAKWHQ000000000SAMN21467622
AGK0861
GCA_022544455.1ContigJAKWIV000000000SAMN21467647
AGK0506
GCA_022544435.1ScaffoldJAKWIU000000000SAMN21467648
AGK0507
GCA_022544415.1ScaffoldJAKWIT000000000SAMN21467649
AGK0508
GCA_022544335.1ContigJAKWIP000000000SAMN21467653
AGK0555
GCA_022544315.1ContigJAKWIM000000000SAMN21467625
AGK0576
GCA_022544295.1ScaffoldJAKWIO000000000SAMN21467623
AGK0574
GCA_022544275.1ScaffoldJAKWIN000000000SAMN21467624
AGK0575
GCA_022544255.1ScaffoldJAKWIL000000000SAMN21467626
AGK0578
GCA_022544235.1ScaffoldJAKWIJ000000000SAMN21467628
AGK0580
GCA_022544205.1ScaffoldJAKWIK000000000SAMN21467627
AGK0579
GCA_022544375.1ScaffoldJAKWIR000000000SAMN21467651
AGK0544
GCA_022544175.1ScaffoldJAKWIH000000000SAMN21467630
AGK0614
GCA_022544155.1ScaffoldJAKWIF000000000SAMN21467632
AGK0618
GCA_022544135.1ScaffoldJAKWIE000000000SAMN21467633
AGK0621
GCA_022544115.1ContigJAKWIG000000000SAMN21467631
AGK0617
GCA_022544085.1ScaffoldJAKWIC000000000SAMN21467635
AGK0671
GCA_022544355.1ScaffoldJAKWIQ000000000SAMN21467652
AGK0550
GCA_022544385.1ContigJAKWIS000000000SAMN21467650
AGK0526
GCA_022544195.1ScaffoldJAKWII000000000SAMN21467629
AGK0581
GCA_022542425.1ScaffoldJAKVYT000000000SAMN21467456
AGK0498
GCA_022541195.1ContigJAKVWO000000000SAMN21467429
AGK0765
GCA_022541175.1ScaffoldJAKVWN000000000SAMN21467430
AGK0766
GCA_022541155.1ScaffoldJAKVWM000000000SAMN21467431
AGK0767
GCA_022541135.1ContigJAKVWL000000000SAMN21467432
AGK0768
GCA_022541115.1ContigJAKVWK000000000SAMN21467433
AGK0769
GCA_022542395.1ScaffoldJAKVYS000000000SAMN21467457
AGK0499
GCA_022542375.1ContigJAKVYR000000000SAMN21467458
AGK0500
GCA_022542355.1ScaffoldJAKVYQ000000000SAMN21467459
AGK0501
GCA_022542335.1ContigJAKVYP000000000SAMN21467460
AGK0502
GCA_022542315.1ScaffoldJAKVYO000000000SAMN21467461
AGK0513
GCA_022542295.1ContigJAKVYM000000000SAMN21467463
AGK0516
GCA_022542275.1ScaffoldJAKVYN000000000SAMN21467462
AGK0515
GCA_022542255.1ContigJAKVYL000000000SAMN21467464
AGK0518
GCA_022542235.1ScaffoldJAKVYK000000000SAMN21467465
AGK0519
GCA_022542215.1ScaffoldJAKVYJ000000000SAMN21467466
AGK0520
GCA_022542185.1ScaffoldJAKVYH000000000SAMN21467468
AGK0532
GCA_022542175.1ScaffoldJAKVYI000000000SAMN21467467
AGK0522
GCA_022542155.1ContigJAKVYG000000000SAMN21467469
AGK0535
GCA_022542135.1ScaffoldJAKVYF000000000SAMN21467470
AGK0536
GCA_022542115.1ContigJAKVYE000000000SAMN21467471
AGK0537
GCA_022542095.1ScaffoldJAKVYD000000000SAMN21467472
AGK0557
GCA_022542075.1ScaffoldJAKVYC000000000SAMN21467473
AGK0558
GCA_022542055.1ScaffoldJAKVYB000000000SAMN21467474
AGK0559
GCA_022542025.1ContigJAKVXY000000000SAMN21467477
AGK0562
GCA_022542015.1ScaffoldJAKVXZ000000000SAMN21467476
AGK0561
GCA_022541985.1ContigJAKVYA000000000SAMN21467475
AGK0560
GCA_022541975.1ScaffoldJAKVXX000000000SAMN21467439
AGK0563
GCA_022541955.1ContigJAKVXW000000000SAMN21467440
AGK0564
GCA_022541935.1ScaffoldJAKVXV000000000SAMN21467441
AGK0565
GCA_022541905.1ScaffoldJAKVXS000000000SAMN21467444
AGK0623
GCA_022541895.1ScaffoldJAKVXT000000000SAMN21467443
AGK0613
GCA_022541875.1ScaffoldJAKVXU000000000SAMN21467442
AGK0567
GCA_022541855.1ScaffoldJAKVXR000000000SAMN21467445
AGK0624
GCA_022541835.1ScaffoldJAKVXQ000000000SAMN21467446
AGK0625
GCA_022541795.1ScaffoldJAKVXO000000000SAMN21467448
AGK0628
GCA_022541815.1ScaffoldJAKVXP000000000SAMN21467447
AGK0627
GCA_022541735.1ScaffoldJAKVXN000000000SAMN21467449
AGK0639
GCA_022541755.1ScaffoldJAKVXM000000000SAMN21467450
AGK0640
GCA_022541745.1ScaffoldJAKVXL000000000SAMN21467451
AGK0641
GCA_022541715.1ScaffoldJAKVXK000000000SAMN21467452
AGK0642
GCA_022541695.1ScaffoldJAKVXJ000000000SAMN21467453
AGK0645
GCA_022541665.1ScaffoldJAKVXG000000000SAMN21467411
AGK0679
GCA_022541655.1ContigJAKVXF000000000SAMN21467412
AGK0731
GCA_022541635.1ContigJAKVXI000000000SAMN21467454
AGK0646
GCA_022541615.1ScaffoldJAKVXH000000000SAMN21467455
AGK0667
GCA_022541595.1ScaffoldJAKVXE000000000SAMN21467413
AGK0740
GCA_022541575.1ScaffoldJAKVXC000000000SAMN21467415
AGK0742
GCA_022541555.1ScaffoldJAKVXA000000000SAMN21467417
AGK0744
GCA_022541535.1ScaffoldJAKVXD000000000SAMN21467414
AGK0741
GCA_022541515.1ScaffoldJAKVXB000000000SAMN21467416
AGK0743
GCA_022541495.1ScaffoldJAKVWY000000000SAMN21467419
AGK0746
GCA_022541475.1ContigJAKVWV000000000SAMN21467422
AGK0753
GCA_022541455.1ScaffoldJAKVWZ000000000SAMN21467418
AGK0745
GCA_022541425.1ContigJAKVWW000000000SAMN21467421
AGK0752
GCA_022541415.1ScaffoldJAKVWX000000000SAMN21467420
AGK0751
GCA_022541395.1ScaffoldJAKVWT000000000SAMN21467424
AGK0760
GCA_022541375.1ContigJAKVWU000000000SAMN21467423
AGK0754
GCA_022541355.1ScaffoldJAKVWR000000000SAMN21467426
AGK0762
GCA_022541325.1ScaffoldJAKVWQ000000000SAMN21467427
AGK0763
GCA_022541315.1ScaffoldJAKVWS000000000SAMN21467425
AGK0761
GCA_022541285.1ScaffoldJAKVWG000000000SAMN21467437
AGK0773
GCA_022541275.1ScaffoldJAKVWP000000000SAMN21467428
AGK0764
GCA_022541255.1ContigJAKVWJ000000000SAMN21467434
AGK0770
GCA_022541085.1ContigJAKVWI000000000SAMN21467435
AGK0771
GCA_022541065.1ContigJAKVWH000000000SAMN21467436
AGK0772
GCA_022541045.1ScaffoldJAKVWF000000000SAMN21467438
AGK0774
GCA_022541025.1ScaffoldJAKVWE000000000SAMN21467410
AGK0775
GCA_022539995.1ScaffoldJAKWGQ000000000SAMN21467497
AGK0664
GCA_022539845.1ScaffoldJAKWGI000000000SAMN21467494
AGK0678
GCA_022540165.1ContigJAKWHO000000000SAMN21467513
AGK0505
GCA_022543655.1ScaffoldJAKWHF000000000SAMN21467512
AGK0556
GCA_022543775.1ScaffoldJAKWHM000000000SAMN21467515
AGK0511
GCA_022543755.1ScaffoldJAKWHI000000000SAMN21467519
AGK0540
GCA_022543725.1ScaffoldJAKWHG000000000SAMN21467521
AGK0542
GCA_022543715.1ScaffoldJAKWHE000000000SAMN21467499
AGK0569
GCA_022543695.1ScaffoldJAKWHH000000000SAMN21467520
AGK0541
GCA_022543675.1ScaffoldJAKWHD000000000SAMN21467500
AGK0573
GCA_022543855.1ScaffoldJAKWHN000000000SAMN21467514
AGK0510
GCA_022543825.1ScaffoldJAKWHL000000000SAMN21467516
AGK0523
GCA_022543815.1ScaffoldJAKWHK000000000SAMN21467517
AGK0525
GCA_022543785.1ScaffoldJAKWHJ000000000SAMN21467518
AGK0531
GCA_022543625.1ScaffoldJAKWGZ000000000SAMN21467504
AGK0587
GCA_022543615.1ScaffoldJAKWHA000000000SAMN21467503
AGK0586
GCA_022543595.1ScaffoldJAKWGX000000000SAMN21467505
AGK0616
GCA_022543575.1ScaffoldJAKWGV000000000SAMN21467507
AGK0631
GCA_022543555.1ScaffoldJAKWGW000000000SAMN21467506
AGK0630
GCA_022543535.1ScaffoldJAKWGT000000000SAMN21467509
AGK0636
GCA_022543495.1ScaffoldJAKWGR000000000SAMN21467511
AGK0644
GCA_022539825.1ScaffoldJAKWGH000000000SAMN21467488
AGK0680
GCA_022539965.1ScaffoldJAKWGO000000000SAMN21467495
AGK0670
GCA_022539945.1ScaffoldJAKWGN000000000SAMN21467489
AGK0672
GCA_022539925.1ContigJAKWGM000000000SAMN21467490
AGK0673
GCA_022539905.1ScaffoldJAKWGL000000000SAMN21467491
AGK0674
GCA_022539885.1ScaffoldJAKWGJ000000000SAMN21467493
AGK0677
GCA_022539865.1ScaffoldJAKWGK000000000SAMN21467492
AGK0675
GCA_022540125.1ScaffoldJAKWHC000000000SAMN21467501
AGK0577
GCA_022540105.1ScaffoldJAKWHB000000000SAMN21467502
AGK0582
GCA_022540085.1ScaffoldJAKWGY000000000SAMN21467496
AGK0615
GCA_022540065.1ScaffoldJAKWGS000000000SAMN21467510
AGK0643
GCA_022540045.1ScaffoldJAKWGU000000000SAMN21467508
AGK0632
GCA_022540025.1ScaffoldJAKWGP000000000SAMN21467498
AGK0669
GCA_022539805.1ScaffoldJAKVUK000000000SAMN21467482
AGK0512
GCA_022539785.1ContigJAKVUJ000000000SAMN21467483
AGK0528
GCA_022539765.1ScaffoldJAKVUG000000000SAMN21467486
AGK0548
GCA_022539745.1ScaffoldJAKVUI000000000SAMN21467484
AGK0538
GCA_022539725.1ScaffoldJAKVUH000000000SAMN21467485
AGK0547
GCA_022539705.1ScaffoldJAKVUF000000000SAMN21467487
AGK0553
GCA_022539685.1ScaffoldJAKVUE000000000SAMN21467479
AGK0583
GCA_022539645.1ContigJAKVUC000000000SAMN21467481
AGK0676
GCA_022539615.1ScaffoldJAKVUD000000000SAMN21467480
AGK0666
GCA_022540145.1ScaffoldJAKVUL000000000SAMN21467608
AGK0883
GCA_022541005.1ScaffoldJAKVWD000000000SAMN21467609
AGK0504
GCA_022540985.1ScaffoldJAKVWB000000000SAMN21467611
AGK0524
GCA_022540965.1ScaffoldJAKVWA000000000SAMN21467612
AGK0527
GCA_022540935.1ScaffoldJAKVVZ000000000SAMN21467613
AGK0530
GCA_022540925.1ScaffoldJAKVVY000000000SAMN21467614
AGK0539
GCA_022540905.1ScaffoldJAKVVX000000000SAMN21467615
AGK0543
GCA_022540865.1ScaffoldJAKVVW000000000SAMN21467616
AGK0545
GCA_022540875.1ScaffoldJAKVVV000000000SAMN21467617
AGK0546
GCA_022540835.1ScaffoldJAKVVS000000000SAMN21467620
AGK0552
GCA_022540825.1ScaffoldJAKVVT000000000SAMN21467619
AGK0551
GCA_022540795.1ScaffoldJAKVVR000000000SAMN21467621
AGK0554
GCA_022540785.1ScaffoldJAKVVQ000000000SAMN21467592
AGK0568
GCA_022540765.1ScaffoldJAKVVP000000000SAMN21467593
AGK0570
GCA_022540745.1ScaffoldJAKVVO000000000SAMN21467594
AGK0571
GCA_022540715.1ScaffoldJAKVVM000000000SAMN21467596
AGK0584
GCA_022540705.1ScaffoldJAKVVN000000000SAMN21467595
AGK0572
GCA_022540675.1ScaffoldJAKVVK000000000SAMN21467598
AGK0619
GCA_022540665.1ScaffoldJAKVVL000000000SAMN21467597
AGK0585
GCA_022540645.1ScaffoldJAKVVI000000000SAMN21467600
AGK0633
GCA_022540625.1ScaffoldJAKVVJ000000000SAMN21467599
AGK0620
GCA_022540605.1ScaffoldJAKVVG000000000SAMN21467602
AGK0635
GCA_022540575.1ScaffoldJAKVVF000000000SAMN21467603
AGK0637
GCA_022540565.1ScaffoldJAKVVH000000000SAMN21467601
AGK0634
GCA_022540545.1ScaffoldJAKVVE000000000SAMN21467604
AGK0638
GCA_022540525.1ScaffoldJAKVVD000000000SAMN21467578
AGK0733
GCA_022540505.1ScaffoldJAKVVC000000000SAMN21467579
AGK0738
GCA_022540485.1ScaffoldJAKVVB000000000SAMN21467580
AGK0747
GCA_022540465.1ScaffoldJAKVVA000000000SAMN21467581
AGK0748
GCA_022540445.1ScaffoldJAKVUX000000000SAMN21467584
AGK0755
GCA_022540425.1ScaffoldJAKVUZ000000000SAMN21467582
AGK0749
GCA_022540405.1ScaffoldJAKVUY000000000SAMN21467583
AGK0750
GCA_022540385.1ScaffoldJAKVUW000000000SAMN21467585
AGK0756
GCA_022540365.1ScaffoldJAKVUV000000000SAMN21467586
AGK0757
GCA_022540345.1ScaffoldJAKVUU000000000SAMN21467587
AGK0758
GCA_022540315.1ScaffoldJAKVUT000000000SAMN21467588
AGK0776
GCA_022540305.1ScaffoldJAKVUS000000000SAMN21467589
AGK0777
GCA_022540285.1ScaffoldJAKVUQ000000000SAMN21467591
AGK0780
GCA_022540265.1ScaffoldJAKVUR000000000SAMN21467590
AGK0779
GCA_022540245.1ScaffoldJAKVUP000000000SAMN21467577
AGK0781
GCA_022540225.1ScaffoldJAKVUO000000000SAMN21467605
AGK0860
GCA_022540195.1ScaffoldJAKVUN000000000SAMN21467606
AGK0865
GCA_022540185.1ScaffoldJAKVUM000000000SAMN21467607
AGK0866
GCA_022541235.1ScaffoldJAKVWC000000000SAMN21467610
AGK0509
GCA_022541215.1ScaffoldJAKVVU000000000SAMN21467618
AGK0549

Supplemental Content

Recent activity

  • Multiple
    Multiple
    E. coli and KESC group 3GCRE/CRE from hospital wastewater Genome sequencing and assembly
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center