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Accession: PRJNA738374 ID: 738374

AMR in enterobacteria from wildlife, Senegal

Antimicrobial resistance and study of clonal complex of enterobacteria isolated from primates and environmental samples in Senegal.
AccessionPRJNA738374
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsAbdallah R et al., "Population Diversity of Antibiotic Resistant Enterobacterales in Samples From Wildlife Origin in Senegal: Identification of a Multidrug Resistance Transposon Carrying bla (CTX-M-15) in Escherichia coli.", Front Microbiol, 2022;13:838392
SubmissionRegistration date: 16-Jun-2021
IHU Mediterranee Infection
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)62
Publications
PubMed1
PMC1
Other datasets
BioSample69
Assembly62
Assembly details:
Assembly levelNumber of Assemblies
58
4
62
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_025536255.1ContigJAHTVZ000000000SAMN19728257
Q2146
GCA_025535935.1ScaffoldJAHTVQ000000000SAMN19728271
Q2150
GCA_025535835.1ScaffoldJAHTVN000000000SAMN19728277
Q2168
GCA_025536595.1ScaffoldJAHTWJ000000000SAMN19728234
Q0180
GCA_025536315.1ScaffoldJAHTWB000000000SAMN19728254
Q3822
GCA_025535675.1ScaffoldJAHTVM000000000SAMN19728283
Q3825
GCA_025535875.1ScaffoldJAHTVP000000000SAMN19728274
Q3815
GCA_025535395.1ScaffoldJAHTVJ000000000SAMN19728288
Q3800
GCA_025535535.1ScaffoldJAHOAB000000000SAMN19728284
Q3795
GCA_025535815.1ScaffoldJAHOAC000000000SAMN19728278
Q2152
GCA_025536175.1ScaffoldJAHTVX000000000SAMN19728260
Q3806
GCA_025536135.1ScaffoldJAHTVW000000000SAMN19728263
Q3796
GCA_025536115.1ScaffoldJAHTVV000000000SAMN19728264
Q3818
GCA_025536095.1ScaffoldJAHTVU000000000SAMN19728265
Q3831
GCA_025536275.1ScaffoldJAHTWA000000000SAMN19728256
Q3807
GCA_025536465.1ScaffoldJAHTWF000000000SAMN19728245
Q3814
GCA_025544735.1ScaffoldJAHTWP000000000SAMN19728220
Q0181
GCA_025535525.1ScaffoldJAHTVL000000000SAMN19728285
Q2153
GCA_025535695.1ScaffoldJAHUUT000000000SAMN19728282
Q3817
GCA_025535715.1ScaffoldJAHUUU000000000SAMN19728281
Q3798
GCA_025535895.1ScaffoldJAHUUW000000000SAMN19728276
Q2151
GCA_025535845.1ScaffoldJAHUUV000000000SAMN19728279
Q3799
GCA_025535955.1ScaffoldJAHUUX000000000SAMN19728273
Q3827
GCA_025536015.1ScaffoldJAHOAE000000000SAMN19728269
Q3809
GCA_025535975.1ScaffoldJAHUUY000000000SAMN19728272
Q3802
GCA_025536155.1ScaffoldJAHOAF000000000SAMN19728262
Q3794
GCA_025536215.1ScaffoldJAHUVA000000000SAMN19728259
Q2148
GCA_025536195.1ScaffoldJAHUUZ000000000SAMN19728261
Q3808
GCA_025536435.1ScaffoldJAHUVD000000000SAMN19728246
Q3810
GCA_025536415.1ScaffoldJAHOAG000000000SAMN19728247
Q3804
GCA_025536395.1ScaffoldJAHUVC000000000SAMN19728249
Q3803
GCA_025536455.1ScaffoldJAHUVE000000000SAMN19728243
Q3813
GCA_025535375.1ScaffoldJAHUUS000000000SAMN19728286
Q3828
GCA_025536035.1ScaffoldJAHTVR000000000SAMN19728268
Q3823
GCA_025535515.1ScaffoldJAHTVK000000000SAMN19728287
Q3829
GCA_025535905.1ScaffoldJAHTVO000000000SAMN19728275
Q3801
GCA_025536075.1ScaffoldJAHTVS000000000SAMN19728267
Q3826
GCA_025544755.1ScaffoldJAHTWO000000000SAMN19728221
Q2154
GCA_025544715.1ScaffoldJAHTWN000000000SAMN19728224
Q2157
GCA_025544835.1ScaffoldJAHOAP000000000SAMN19728223
Q2156
GCA_025544795.1ContigJAHOAM000000000SAMN19728228
Q2160
GCA_025536675.1ScaffoldJAHOAL000000000SAMN19728230
Q2170
GCA_025536655.1ScaffoldJAHTWK000000000SAMN19728231
Q2161
GCA_025536635.1ScaffoldJAHOAJ000000000SAMN19728233
Q0179
GCA_025536575.1ScaffoldJAHOAI000000000SAMN19728235
Q2163
GCA_025536555.1ScaffoldJAHOAH000000000SAMN19728238
Q2164
GCA_025536535.1ScaffoldJAHTWI000000000SAMN19728239
Q3830
GCA_025536515.1ScaffoldJAHTWG000000000SAMN19728242
Q3824
GCA_025536495.1ScaffoldJAHTWH000000000SAMN19728240
Q2165
GCA_025535995.1ScaffoldJAHOAD000000000SAMN19728270
Q2149
GCA_025536055.1ScaffoldJAHTVT000000000SAMN19728266
Q1946
GCA_020148125.1ScaffoldJAHREM000000000SAMN19728280
Q2548
GCA_025544775.1ScaffoldJAHOAN000000000SAMN19728226
Q2159
GCA_025544815.1ScaffoldJAHOAO000000000SAMN19728225
Q2158
GCA_025544695.1ScaffoldJAHTWL000000000SAMN19728229
Q2169
GCA_025536615.1ContigJAHOAK000000000SAMN19728232
Q2162
GCA_025536375.1ScaffoldJAHTWE000000000SAMN19728251
Q2142
GCA_025536355.1ScaffoldJAHTWD000000000SAMN19728252
Q2143
GCA_025536335.1ContigJAHTWC000000000SAMN19728253
Q2144
GCA_025536235.1ScaffoldJAHTVY000000000SAMN19728258
Q2147
GCA_025544655.1ScaffoldJAHTWM000000000SAMN19728227
Q3812
GCA_025536295.1ScaffoldJAHUVB000000000SAMN19728255
Q2145

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