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Accession: PRJNA722682 ID: 722682

Determining the burden of carbapenem-resistant Enterobacterales from a tertiary public heath setting in Bangladesh: a clinical, epidemiological, and molecular study

Enterobacterales infections and colonisation from a Bangladeshi hospital
AccessionPRJNA722682
Data TypeRaw sequence reads
ScopeMultispecies
SubmissionRegistration date: 17-Apr-2021
Cardiff University School of Medicine
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)218
WGS master201
Genomic DNA17
Protein Sequences2470
Other datasets
BioSample203
Assembly201
Assembly details:
Assembly levelNumber of Assemblies
5
196
201
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_040294745.1ContigJAGSQW000000000SAMN18805923
dme_h56b
GCA_040278545.1ContigJAGYXO000000000SAMN18802464
rsca610a
GCA_040326545.1ContigJAGSQE000000000SAMN18802463
rsca131b
GCA_040326595.1ContigJAGSQF000000000SAMN18802462
rsca114b
GCA_040326525.1ContigJAGSQD000000000SAMN18802465
rscb59
GCA_040326305.1ContigJAGSQP000000000SAMN18802476
rscw551
GCA_040326275.1ContigJAGSQO000000000SAMN18802477
rscw594
GCA_040326515.1ContigJAGSQB000000000SAMN18802467
rscf12
GCA_040326535.1ContigJAGSQC000000000SAMN18802466
rscf10
GCA_040326495.1ContigJAGSQA000000000SAMN18802468
rscf161
GCA_040326465.1ContigJAGSPZ000000000SAMN18802469
rscf162
GCA_040326445.1ContigJAGSPX000000000SAMN18802471
rscf302
GCA_040326425.1ContigJAGSPY000000000SAMN18802470
rscf163
GCA_040326405.1ContigJAGSPW000000000SAMN18802472
rscf72
GCA_040326675.1ContigJAGSQL000000000SAMN18802451
dmcf454b
GCA_040326695.1ContigJAGSQI000000000SAMN18802457
dmck980b
GCA_040326655.1ContigJAGSQJ000000000SAMN18802456
dmck979B
GCA_040326285.1ContigJAGSQN000000000SAMN18802478
rscy235
GCA_040326335.1ContigJAGSQM000000000SAMN18802480
rscy667
GCA_040839455.1ContigJAGSQK000000000SAMN18802453
dmcf593b
GCA_040278525.1ContigJAGYXQ000000000SAMN18802479
rscy664
GCA_040278565.1ScaffoldJAGYXP000000000SAMN18802452
dmcf556b
GCA_040269725.1ContigJAGSJT000000000SAMN18789913
rseb_c525
GCA_040269715.1ContigJAGSJR000000000SAMN18789911
rseb_c137
GCA_040326395.1ContigJAGSQS000000000SAMN18802473
rscr519
GCA_040326375.1ContigJAGSQR000000000SAMN18802474
rscr522
GCA_040326345.1ContigJAGSQQ000000000SAMN18802475
rscr524
GCA_040326635.1ContigJAGSQU000000000SAMN18802458
dmcr621c
GCA_040326615.1ContigJAGSQH000000000SAMN18802460
dmcs896
GCA_040412175.1ContigJAGSQT000000000SAMN18802459
dmcr749c
GCA_040412155.1ContigJAGSQG000000000SAMN18802461
dmcs955
GCA_040276515.1ContigJAGSIF000000000SAMN18789951
dmeb_ar402
GCA_040276475.1ContigJAGSII000000000SAMN18789874
beb_c115
GCA_040276455.1ContigJAGSIJ000000000SAMN18789875
beb_c117
GCA_040276425.1ContigJAGSIN000000000SAMN18789879
dmeb_c106b
GCA_040276305.1ContigJAGSIW000000000SAMN18789890
dmeb_c493a
GCA_040276285.1ContigJAGSIT000000000SAMN18789887
dmeb_c43
GCA_040269735.1ContigJAGSJS000000000SAMN18789912
rseb_c18b
GCA_040269835.1ContigJAGSJM000000000SAMN18789906
dmeb_c847a
GCA_040269695.1ContigJAGSJU000000000SAMN18789914
rseb_c578b
GCA_040269665.1ContigJAGSJV000000000SAMN18789915
rseb_c652a
GCA_040269655.1ContigJAGSJW000000000SAMN18789916
rseb_h397a
GCA_040269635.1ContigJAGSJX000000000SAMN18789917
rseb_h399a
GCA_040269585.1ContigJAGSJZ000000000SAMN18789919
rseb_h518b
GCA_040269595.1ContigJAGSJY000000000SAMN18789918
rseb_h507a
GCA_040269575.1ContigJAHCTE000000000SAMN18789920
rseb_h538b
GCA_040269555.1ContigJAGSKA000000000SAMN18789921
rseb_h539b
GCA_040269525.1ContigJAHCTF000000000SAMN18789922
rseb_h604a
GCA_040269515.1ContigJAGSKB000000000SAMN18789923
rseb_h623b
GCA_040269495.1ContigJAGSKC000000000SAMN18789924
rseb_h624b
GCA_040269815.1ContigJAGSJO000000000SAMN18789908
dmeb_c85a
GCA_040269785.1ContigJAGSJP000000000SAMN18789909
dmeb_c957
GCA_040269775.1ContigJAGSJQ000000000SAMN18789910
dmeb_c96
GCA_040269985.1ContigJAGSIX000000000SAMN18789891
dmeb_c557
GCA_040269995.1ContigJAGSJD000000000SAMN18789897
dmeb_c687c
GCA_040269945.1ContigJAGSJF000000000SAMN18789899
dmeb_c715
GCA_040269955.1ContigJAGSJG000000000SAMN18789900
dmeb_c744b
GCA_040269915.1ScaffoldJAGSKD000000000SAMN18789925
rseb_h717a
GCA_040269905.1ContigJAGSJH000000000SAMN18789901
dmeb_c762
GCA_040269875.1ContigJAGSJI000000000SAMN18789902
dmeb_c790b
GCA_040269855.1ContigJAGSJK000000000SAMN18789904
dmeb_c844b
GCA_040276265.1ContigJAGSIU000000000SAMN18789888
dmeb_c460b
GCA_040276245.1ContigJAGSJA000000000SAMN18789894
dmeb_c596
GCA_040276225.1ContigJAGSIY000000000SAMN18789892
dmeb_c56a
GCA_040276205.1ContigJAGSIZ000000000SAMN18789893
dmeb_c589
GCA_040276185.1ContigJAGSJB000000000SAMN18789895
dmeb_c606
GCA_040276165.1ContigJAGSJC000000000SAMN18789896
dmeb_c673b
GCA_040276145.1ContigJAGSJE000000000SAMN18789898
dmeb_c705a
GCA_040276405.1ContigJAHCTC000000000SAMN18789880
dmeb_c162b
GCA_040276385.1ContigJAGSIQ000000000SAMN18789884
dmeb_c295b
GCA_040276365.1ContigJAHCTD000000000SAMN18789882
dmeb_c275
GCA_040276345.1ContigJAGSIS000000000SAMN18789886
dmeb_c407b
GCA_040276325.1ContigJAGSIV000000000SAMN18789889
dmeb_c465b
GCA_040286085.1ContigJAGSJJ000000000SAMN18789903
dmeb_c801b
GCA_040286065.1ContigJAGSJN000000000SAMN18789907
dmeb_c853
GCA_040285995.1ContigJAGSIM000000000SAMN18789878
beb_c2b
GCA_040286035.1ContigJAGSIP000000000SAMN18789883
dmeb_c292b
GCA_040286015.1ContigJAGSIR000000000SAMN18789885
dmeb_c388
GCA_040285975.1ContigJAGSIO000000000SAMN18789881
dmeb_c17
GCA_040285945.1ContigJAGSIL000000000SAMN18789877
beb_c250b
GCA_040285935.1ContigJAGSIK000000000SAMN18789876
beb_c20b
GCA_040294785.1ContigJAGSJL000000000SAMN18789905
dmeb_c845a
GCA_040276555.1ContigJAGSKF000000000SAMN18789953
dmeb_a227b
GCA_040276535.1ContigJAGSKE000000000SAMN18789952
dmeb_a200
GCA_040253785.1ContigJAGYXU000000000SAMN18805914
rsmm612a
GCA_040253715.1ContigJAGYXS000000000SAMN18805922
rsmm666a
GCA_040253755.1ScaffoldJAGYXT000000000SAMN18805920
dmmm609a
GCA_040294855.1ContigJAGSRB000000000SAMN18805916
rsmm575a
GCA_040294845.1ContigJAGSRA000000000SAMN18805917
dmmm173a
GCA_040294825.1ContigJAGSQZ000000000SAMN18805918
dmmm372a
GCA_040294805.1ContigJAGSQY000000000SAMN18805919
dmmm506a
GCA_040294965.1ContigJAGSRF000000000SAMN18805911
rsmm570a
GCA_040294925.1ContigJAGSRE000000000SAMN18805912
rsmm583a
GCA_040294905.1ContigJAGSRC000000000SAMN18805915
dmmm905a
GCA_040295325.1ContigJAGSRD000000000SAMN18805913
rsmm588a
GCA_040294765.1ContigJAGSQX000000000SAMN18805921
dmmm864
GCA_040294885.1ContigJAGSSQ000000000SAMN18805924
dmpa233
GCA_040277195.1ContigJAGSLO000000000SAMN18793926
dmpm358a
GCA_040277175.1ContigJAHCTI000000000SAMN18793923
dmpm34
GCA_040277155.1ContigJAGSLP000000000SAMN18793927
dmpm36
GCA_040277275.1ContigJAGSLM000000000SAMN18793924
dmpm348
GCA_040277325.1ContigJAGSLL000000000SAMN18793922
dmpm331a
GCA_040276495.1ContigJAGSML000000000SAMN18793951
dmpm966a
GCA_040277035.1ContigJAGSLQ000000000SAMN18793928
dmpm396A
GCA_040277015.1ContigJAGSLU000000000SAMN18793932
dmpm44a
GCA_040276955.1ContigJAGSLS000000000SAMN18793930
dmpm401a
GCA_040276965.1ContigJAGSLR000000000SAMN18793929
dmpm400
GCA_040276935.1ContigJAGSLV000000000SAMN18793933
dmpm497a
GCA_040276915.1ContigJAGSLW000000000SAMN18793934
dmpm499
GCA_040276895.1ContigJAGSLY000000000SAMN18793936
dmpm545a
GCA_040276875.1ContigJAGSLX000000000SAMN18793935
dmpm534
GCA_040276855.1ContigJAGSMA000000000SAMN18793938
dmpm617a
GCA_040276835.1ContigJAHCTJ000000000SAMN18793939
dmpm629c
GCA_040276815.1ContigJAGSLZ000000000SAMN18793937
dmpm601
GCA_040276795.1ContigJAGSMC000000000SAMN18793941
dmpm636
GCA_040276775.1ContigJAGSMB000000000SAMN18793940
dmpm630a
GCA_040276755.1ContigJAGSMD000000000SAMN18793942
dmpm640a
GCA_040276735.1ContigJAGSMG000000000SAMN18793945
dmpm689
GCA_040276715.1ContigJAGSME000000000SAMN18793943
dmpm646
GCA_040276675.1ContigJAHCTK000000000SAMN18793946
dmpm698
GCA_040276685.1ContigJAGSMF000000000SAMN18793944
dmpm649
GCA_040276655.1ContigJAGSMH000000000SAMN18793947
dmpm747
GCA_040276635.1ContigJAGSMM000000000SAMN18793952
dmpm974b
GCA_040276615.1ContigJAGSMI000000000SAMN18793948
dmpm81
GCA_040276595.1ContigJAGSMJ000000000SAMN18793949
dmpm947
GCA_040276575.1ContigJAGSMK000000000SAMN18793950
dmpm960a
GCA_040277235.1ScaffoldJAGSLN000000000SAMN18793925
dmpm35
GCA_040278485.1ContigJAGSKG000000000SAMN18793889
bpm166a
GCA_040278455.1ContigJAGSKI000000000SAMN18793891
bpm195b
GCA_040278425.1ContigJAGSKJ000000000SAMN18793892
bpm230
GCA_040278405.1ContigJAGSKH000000000SAMN18793890
bpm190
GCA_040278375.1ContigJAGSKK000000000SAMN18793893
bpm241
GCA_040278355.1ContigJAGSKL000000000SAMN18793894
bpm246
GCA_040278335.1ContigJAGSKN000000000SAMN18793896
bpm79a
GCA_040278315.1ContigJAGSKM000000000SAMN18793895
bpm250c
GCA_040278295.1ContigJAGSKP000000000SAMN18793899
dmpm132a
GCA_040278235.1ContigJAHCTG000000000SAMN18793897
bpm86
GCA_040278215.1ContigJAGSKO000000000SAMN18793898
dmpm111
GCA_040278155.1ContigJAGSKT000000000SAMN18793903
dmpm152a
GCA_040278115.1ContigJAGSKQ000000000SAMN18793900
dmpm134a
GCA_040278075.1ContigJAGSKR000000000SAMN18793901
dmpm149a
GCA_040278055.1ContigJAGSKS000000000SAMN18793902
dmpm150
GCA_040278015.1ContigJAGSKU000000000SAMN18793904
dmpm154
GCA_040277935.1ContigJAGSKV000000000SAMN18793905
dmpm155
GCA_040277895.1ContigJAGSKW000000000SAMN18793906
dmpm157
GCA_040277855.1ContigJAGSKY000000000SAMN18793908
dmpm180
GCA_040277835.1ContigJAGSKX000000000SAMN18793907
dmpm163b
GCA_040277815.1ContigJAGSLC000000000SAMN18793912
dmpm22
GCA_040277775.1ContigJAGSLA000000000SAMN18793910
dmpm213a
GCA_040277755.1ContigJAGSLB000000000SAMN18793911
dmpm218a
GCA_040277715.1ContigJAGSKZ000000000SAMN18793909
dmpm208a
GCA_040277655.1ContigJAGSLD000000000SAMN18793913
dmpm23
GCA_040277615.1ContigJAGSLG000000000SAMN18793916
dmpm261a
GCA_040277595.1ContigJAGSLE000000000SAMN18793914
dmpm230a
GCA_040277555.1ContigJAGSLF000000000SAMN18793915
dmpm231a
GCA_040277535.1ContigJAHCTH000000000SAMN18793917
dmpm262a
GCA_040277475.1ContigJAGSLJ000000000SAMN18793920
dmpm273
GCA_040277455.1ContigJAGSLI000000000SAMN18793919
dmpm267a
GCA_040277395.1ContigJAGSLH000000000SAMN18793918
dmpm265
GCA_040277375.1ContigJAGSLK000000000SAMN18793921
dmpm297a
GCA_040276995.1ContigJAGSLT000000000SAMN18793931
dmpm423a
GCA_040278445.1ScaffoldJAGSIG000000000SAMN18793981
dmpm324
GCA_040278505.1ContigJAGSIH000000000SAMN18794140
dmpm982b
GCA_040839535.1ContigJAGSRK000000000SAMN18805892
dmpro_r182b
GCA_040839525.1ContigJAGSRI000000000SAMN18805894
dmpro_r536a
GCA_040839475.1ContigJAGSRJ000000000SAMN18805893
dmpro_r346a
GCA_040294945.1ContigJAGSSN000000000SAMN18805910
dmpro_s980a
GCA_040295165.1ContigJAGSRH000000000SAMN18805899
dmpro_s316
GCA_040295145.1ContigJAGSSE000000000SAMN18805900
dmpro_s340a
GCA_040295125.1ContigJAGSRG000000000SAMN18805903
dmpro_s621a
GCA_040295105.1ContigJAGSSD000000000SAMN18805901
dmpro_s428a
GCA_040295085.1ContigJAGSSC000000000SAMN18805902
dmpro_s603
GCA_040295065.1ContigJAGSSB000000000SAMN18805904
dmpro_s672
GCA_040295045.1ContigJAGSRY000000000SAMN18805908
dmpro_s887
GCA_040295015.1ContigJAGSSA000000000SAMN18805905
dmpro_s679
GCA_040295005.1ContigJAGSRZ000000000SAMN18805906
dmpro_s749a
GCA_040294985.1ContigJAGSRX000000000SAMN18805909
dmpro_s979a
GCA_040297705.1ContigJAGSSH000000000SAMN18805896
dmpro_s126B
GCA_040297765.1ContigJAGSSK000000000SAMN18805890
bpro_s194
GCA_040297745.1ContigJAGSSG000000000SAMN18805897
dmpro_s151
GCA_040305525.1ContigJAGSSJ000000000SAMN18805891
bpro_s46a
GCA_040305505.1ContigJAGSSM000000000SAMN18805888
bpro_s102a
GCA_040305585.1ContigJAGSSF000000000SAMN18805898
dmpro_s193a
GCA_040305565.1ContigJAGSSL000000000SAMN18805889
bpro_s12
GCA_040839465.1ContigJAGSSI000000000SAMN18805895
dmpro_r714
GCA_040253745.1ContigJAGYXV000000000SAMN18805907
dmpro_s882a
GCA_040285115.1ContigJAGYXR000000000SAMN18802454
dmcf952
GCA_040297785.1ContigJAGSRL000000000SAMN18805887
dmsm872
GCA_040297845.1ContigJAGSRP000000000SAMN18805881
dmsm966b
GCA_040297825.1ContigJAGSRM000000000SAMN18805884
rssm177b
GCA_040298005.1ContigJAGSRR000000000SAMN18805879
dmsm355
GCA_040297985.1ContigJAGSRW000000000SAMN18805874
dmsm118
GCA_040297965.1ContigJAGSRV000000000SAMN18805875
dmsm123
GCA_040297945.1ContigJAGSRQ000000000SAMN18805880
dmsm286b
GCA_040297925.1ContigJAGSRU000000000SAMN18805876
dmsm192
GCA_040297905.1ContigJAGSRN000000000SAMN18805883
dmsm701b
GCA_040297885.1ContigJAGSRT000000000SAMN18805877
dmsm72
GCA_040298245.1ContigJAGSRS000000000SAMN18805878
dmsm94
GCA_040305545.1ContigJAGSRO000000000SAMN18805882
dmsm540
GCA_040297865.1ContigJAGSSP000000000SAMN18805885
dmsm287
GCA_040297805.1ContigJAGSSO000000000SAMN18805886
dmsm713a

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