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Accession: PRJNA666522 ID: 666522

New Zealand Leptospira genomes

A collection of genomes generated from pathogenic Leptospira spp. circulating in New Zealand
AccessionPRJNA666522
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 30-Sep-2020
Massey University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)97
Other datasets
BioSample100
Assembly97
Assembly details:
Assembly levelNumber of Assemblies
58
39
97
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_015318345.1ScaffoldJADHZL000000000SAMN16295694
A4_Mm_MM313
GCA_015318435.1ScaffoldJADHZP000000000SAMN16295644
EVK11
GCA_015318385.1ContigJADHZO000000000SAMN16295645
EVK25
GCA_015318375.1ScaffoldJADHZN000000000SAMN16295646
EVK2
GCA_015318355.1ScaffoldJADHZM000000000SAMN16295693
A4_Mm_MM310
GCA_015318255.1ContigJADHZI000000000SAMN16295704
A4_Ee_MM344
GCA_015318325.1ScaffoldJADHZK000000000SAMN16295700
A4_Mm_MM330
GCA_015318305.1ContigJADHZJ000000000SAMN16295701
A4_Mm_MM332
GCA_015318545.1ScaffoldJADHZV000000000SAMN16295631
P44
GCA_015318575.1ScaffoldJADHZY000000000SAMN16295614
Arb_1958
GCA_015318425.1ScaffoldJADHZQ000000000SAMN16295643
E44
GCA_015318465.1ScaffoldJADHZR000000000SAMN16295640
944
GCA_015318475.1ScaffoldJADHZT000000000SAMN16295633
K4_12
GCA_015318635.1ScaffoldJADHZX000000000SAMN16295615
Bal_Burgas
GCA_015161445.1ScaffoldJADDUO000000000SAMN16295713
MU_Rr_LW001
GCA_015161435.1ContigJADDUR000000000SAMN16295710
A1_Mm_MM043
GCA_015163045.1ContigJADDXH000000000SAMN16295626
T74
GCA_015162535.1ScaffoldJADDWS000000000SAMN16295652
A_Bt_HO907
GCA_015162525.1ScaffoldJADDWR000000000SAMN16295653
A_Bt_HO912
GCA_015162515.1ScaffoldJADDWO000000000SAMN16295656
A1_Mm_MM006
GCA_015163015.1ScaffoldJADDXP000000000SAMN16295616
Tar-Perepelitsin
GCA_015162945.1ContigJADDXN000000000SAMN16295618
Tar14
GCA_015162975.1ScaffoldJADDXJ000000000SAMN16295624
Bal_possum
GCA_015162955.1ContigJADDXO000000000SAMN16295617
Tar10
GCA_015162935.1ContigJADDXM000000000SAMN16295619
Tar18_2
GCA_015162915.1ScaffoldJADDXL000000000SAMN16295621
Bal_mus127
GCA_015162865.1ContigJADDXK000000000SAMN16295623
Gill
GCA_015162825.1ContigJADDXI000000000SAMN16295625
Precious
GCA_015162855.1ScaffoldJADDXD000000000SAMN16295636
I53
GCA_015162765.1ScaffoldJADDXC000000000SAMN16295637
I89
GCA_015162745.1ScaffoldJADDXA000000000SAMN16295639
905
GCA_015162725.1ScaffoldJADDWY000000000SAMN16295642
D25
GCA_015162705.1ScaffoldJADDXB000000000SAMN16295638
205
GCA_015162695.1ScaffoldJADDWZ000000000SAMN16295641
D12
GCA_015162645.1ScaffoldJADDWU000000000SAMN16295650
SN_Ce_RL16
GCA_015162625.1ContigJADDWV000000000SAMN16295649
SN_Ce_RL4
GCA_015162615.1ScaffoldJADDWW000000000SAMN16295648
EVK8
GCA_015162595.1ScaffoldJADDWX000000000SAMN16295647
EVK5
GCA_015162475.1ScaffoldJADDWM000000000SAMN16295658
B1_Mm_MM119
GCA_015162425.1ScaffoldJADDWN000000000SAMN16295657
A1_Mm_MM010
GCA_015162405.1ContigJADDWK000000000SAMN16295660
A2_Mm_MM138
GCA_015162415.1ContigJADDWL000000000SAMN16295659
A2_Mm_MM134
GCA_015162395.1ScaffoldJADDWJ000000000SAMN16295661
A1_Mm_MM013K
GCA_015162355.1ScaffoldJADDWI000000000SAMN16295662
A1_Mm_MM013U
GCA_015162345.1ScaffoldJADDWG000000000SAMN16295664
A2_Mm_MM159
GCA_015162335.1ScaffoldJADDWH000000000SAMN16295663
A2_Mm_MM148
GCA_015162305.1ContigJADDWF000000000SAMN16295665
A2_Mm_MM161
GCA_015162295.1ContigJADDWE000000000SAMN16295666
A2_Mm_MM189
GCA_015162255.1ContigJADDWD000000000SAMN16295667
A2_Ee_MM195
GCA_015162245.1ContigJADDWC000000000SAMN16295668
A2_Ee_MM196
GCA_015162235.1ContigJADDWB000000000SAMN16295669
A2_Mm_MM200
GCA_015162205.1ContigJADDWA000000000SAMN16295670
A2_Mm_MM211
GCA_015162195.1ScaffoldJADDVZ000000000SAMN16295671
A2_Mm_MM242
GCA_015162155.1ScaffoldJADDVY000000000SAMN16295672
A2_Mm_MM244
GCA_015162135.1ScaffoldJADDVW000000000SAMN16295674
A3_Mm_MM257
GCA_015162145.1ContigJADDVX000000000SAMN16295673
A3_Mm_MM256
GCA_015162105.1ScaffoldJADDVU000000000SAMN16295676
A3_Mm_MM259
GCA_015162095.1ContigJADDVV000000000SAMN16295675
A3_Mm_MM258
GCA_015162055.1ScaffoldJADDVT000000000SAMN16295677
A3_Mm_MM260
GCA_015162045.1ScaffoldJADDVS000000000SAMN16295678
A3_Mm_MM261
GCA_015162035.1ContigJADDVR000000000SAMN16295679
A3_Mm_MM262
GCA_015162005.1ScaffoldJADDVQ000000000SAMN16295680
A3_Mm_MM263
GCA_015161995.1ContigJADDVP000000000SAMN16295681
A3_Mm_MM264
GCA_015161965.1ContigJADDVO000000000SAMN16295682
A3_Mm_MM265
GCA_015161945.1ScaffoldJADDVN000000000SAMN16295683
A3_Mm_MM268
GCA_015161935.1ContigJADDVM000000000SAMN16295684
A3_Mm_MM269
GCA_015161905.1ScaffoldJADDVL000000000SAMN16295685
A1_Mm_MM026KB
GCA_015161895.1ScaffoldJADDVK000000000SAMN16295686
A1_Mm_MM026KC
GCA_015161855.1ContigJADDVJ000000000SAMN16295687
A3_Mm_MM272
GCA_015161845.1ContigJADDVI000000000SAMN16295688
A3_Mm_MM273
GCA_015161835.1ContigJADDVH000000000SAMN16295689
A3_Mm_MM275
GCA_015161805.1ContigJADDVG000000000SAMN16295690
A3_Ee_MM277
GCA_015161795.1ScaffoldJADDVF000000000SAMN16295691
A3_Mm_MM280
GCA_015161755.1ContigJADDVE000000000SAMN16295692
A1_Mm_MM028
GCA_015161745.1ContigJADDVD000000000SAMN16295695
A1_Mm_MM031K
GCA_015161735.1ContigJADDVC000000000SAMN16295696
A1_Mm_MM031U
GCA_015161715.1ScaffoldJADDVB000000000SAMN16295697
A4_Mm_MM320
GCA_015161675.1ContigJADDVA000000000SAMN16295698
A4_Mm_MM324
GCA_015161645.1ContigJADDUY000000000SAMN16295702
A4_Mm_MM336
GCA_015161665.1ContigJADDUZ000000000SAMN16295699
A4_Mm_MM325
GCA_015161635.1ScaffoldJADDUX000000000SAMN16295703
A4_Ee_MM342
GCA_015161595.1ContigJADDUU000000000SAMN16295707
A4_Mm_MM354
GCA_015161575.1ContigJADDUW000000000SAMN16295705
A4_Mm_MM350
GCA_015161555.1ScaffoldJADDUV000000000SAMN16295706
A4_Mm_MM351
GCA_015161545.1ScaffoldJADDUS000000000SAMN16295709
A1_Mm_MM037
GCA_015161535.1ContigJADDUT000000000SAMN16295708
A4_Mm_MM361
GCA_015161475.1ContigJADDUP000000000SAMN16295712
B1_Mm_MM098
GCA_015161465.1ScaffoldJADDUQ000000000SAMN16295711
B1_Mm_MM050
GCA_015162605.1ScaffoldJADDWT000000000SAMN16295651
A_Bt_HO905
GCA_015162835.1ScaffoldJADDXF000000000SAMN16295628
ESR8
GCA_015162815.1ScaffoldJADDXG000000000SAMN16295627
EMY7780
GCA_015162795.1ScaffoldJADDXE000000000SAMN16295629
P5661
GCA_015162495.1ScaffoldJADDWQ000000000SAMN16295654
A2_Ee_MM168
GCA_015162505.1ScaffoldJADDWP000000000SAMN16295655
A3_Ee_MM266
GCA_015318565.1ScaffoldJADHZW000000000SAMN16295620
Pom_str68
GCA_015318515.1ScaffoldJADHZU000000000SAMN16295632
AO25ii
GCA_015318485.1ScaffoldJADHZS000000000SAMN16295634
B33

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