ID 658251 - BioProject

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Accession: PRJNA658251 ID: 658251

Outbreak investigation

Outbreak investigations are essential to control and prevent the dissemination of pathogens. More...

Accession	PRJNA658251
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 20-Aug-2020 Akershus University Hospital, University of Oslo
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	69
WGS master	43
Genomic DNA	26
Other datasets
BioSample	70
Assembly	69

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Contig

Total

26
43
69

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_043950105.1		1	SAMN44050431	Kp_01_IT	Klebsiella pneumoniae
GCA_043950095.1		1	SAMN44050432	Kp_02_IT	Klebsiella pneumoniae
GCA_043950085.1		1	SAMN44050433	Kp_03_IT	Klebsiella pneumoniae
GCA_043950075.1		1	SAMN44050434	Kp_04_IT	Klebsiella pneumoniae
GCA_043950065.1		1	SAMN44050436	Kp_06_IT	Klebsiella pneumoniae
GCA_043950055.1		1	SAMN44050435	Kp_05_IT	Klebsiella pneumoniae
GCA_043678145.1	JBICQZ000000000		SAMN44050429	Kp_05_48h	Klebsiella pneumoniae
GCA_043678135.1	JBICRA000000000		SAMN44050428	Kp_04_48h	Klebsiella pneumoniae
GCA_043678115.1	JBICRB000000000		SAMN44050427	Kp_03_48h	Klebsiella pneumoniae
GCA_043678375.1	JBICRG000000000		SAMN44050422	Kp_04_20h	Klebsiella pneumoniae
GCA_043678365.1	JBICRJ000000000		SAMN44050419	Kp_01_20h	Klebsiella pneumoniae
GCA_043678355.1	JBICRH000000000		SAMN44050421	Kp_03_20h	Klebsiella pneumoniae
GCA_043678335.1	JBICRE000000000		SAMN44050424	Kp_06_20h	Klebsiella pneumoniae
GCA_043678385.1	JBICRI000000000		SAMN44050420	Kp_02_20h	Klebsiella pneumoniae
GCA_043678295.1	JBICRF000000000		SAMN44050423	Kp_05_20h	Klebsiella pneumoniae
GCA_043678255.1	JBICRD000000000		SAMN44050425	Kp_01_48h	Klebsiella pneumoniae
GCA_043678235.1	JBICQY000000000		SAMN44050430	Kp_06_48h	Klebsiella pneumoniae
GCA_043678215.1	JBICRC000000000		SAMN44050426	Kp_02_48h	Klebsiella pneumoniae
GCA_014336835.1		1	SAMN15862846	R31	Staphylococcus aureus
GCA_014337135.1		1	SAMN15862819	R3	Staphylococcus aureus
GCA_014337115.1		1	SAMN15862824	R9	Staphylococcus aureus
GCA_014337095.1		1	SAMN15862831	R16	Staphylococcus aureus
GCA_014337075.1		1	SAMN15862835	R20	Staphylococcus aureus
GCA_014337055.1		1	SAMN15862836	R21	Staphylococcus aureus
GCA_014337035.1		1	SAMN15862839	R24	Staphylococcus aureus
GCA_014337015.1		1	SAMN15862841	R26	Staphylococcus aureus
GCA_014336995.1		1	SAMN15862842	R27	Staphylococcus aureus
GCA_014336965.1		1	SAMN15862843	R28	Staphylococcus aureus
GCA_014336685.1		1	SAMN15862849	R34	Staphylococcus aureus
GCA_014336505.1		1	SAMN15862854	R39	Staphylococcus aureus
GCA_014336335.1		1	SAMN15862855	R40	Staphylococcus aureus
GCA_014336195.1		1	SAMN15862856	R41	Staphylococcus aureus
GCA_014336015.1		1	SAMN15862858	S1	Staphylococcus aureus
GCA_014335895.1		1	SAMN15862859	S2	Staphylococcus aureus
GCA_014335755.1		1	SAMN15862860	S3	Staphylococcus aureus
GCA_014335605.1		1	SAMN15862862	S5	Staphylococcus aureus
GCA_014335435.1		1	SAMN15862861	S4	Staphylococcus aureus
GCA_014335265.1		1	SAMN15862863	S6	Staphylococcus aureus
GCA_014353125.1	JACSHN000000000		SAMN15862857	R42	Staphylococcus aureus
GCA_014353135.1	JACSHO000000000		SAMN15862853	R38	Staphylococcus aureus
GCA_014353115.1	JACSHQ000000000		SAMN15862851	R36	Staphylococcus aureus
GCA_014353665.1	JACSIO000000000		SAMN15862816	R1	Staphylococcus aureus
GCA_014353645.1	JACSIM000000000		SAMN15862818	R3	Staphylococcus aureus
GCA_014353635.1	JACSIN000000000		SAMN15862817	R2	Staphylococcus aureus
GCA_014353615.1	JACSIL000000000		SAMN15862820	R5	Staphylococcus aureus
GCA_014353595.1	JACSIK000000000		SAMN15862821	R6	Staphylococcus aureus
GCA_014353575.1	JACSIJ000000000		SAMN15862822	R7	Staphylococcus aureus
GCA_014353535.1	JACSII000000000		SAMN15862823	R8	Staphylococcus aureus
GCA_014353525.1	JACSIH000000000		SAMN15862825	R10	Staphylococcus aureus
GCA_014353515.1	JACSIG000000000		SAMN15862826	R11	Staphylococcus aureus
GCA_014353495.1	JACSIF000000000		SAMN15862827	R12	Staphylococcus aureus
GCA_014353445.1	JACSIE000000000		SAMN15862828	R13	Staphylococcus aureus
GCA_014353435.1	JACSID000000000		SAMN15862829	R14	Staphylococcus aureus
GCA_014353425.1	JACSIC000000000		SAMN15862830	R15	Staphylococcus aureus
GCA_014353415.1	JACSIB000000000		SAMN15862832	R17	Staphylococcus aureus
GCA_014353395.1	JACSIA000000000		SAMN15862833	R18	Staphylococcus aureus
GCA_014353375.1	JACSHY000000000		SAMN15862837	R22	Staphylococcus aureus
GCA_014353325.1	JACSHZ000000000		SAMN15862834	R19	Staphylococcus aureus
GCA_014353315.1	JACSHW000000000		SAMN15862840	R25	Staphylococcus aureus
GCA_014353305.1	JACSHV000000000		SAMN15862844	R29	Staphylococcus aureus
GCA_014353295.1	JACSHX000000000		SAMN15862838	R23	Staphylococcus aureus
GCA_014353275.1	JACSHU000000000		SAMN15862845	R30	Staphylococcus aureus
GCA_014353255.1	JACSHS000000000		SAMN15862848	R33	Staphylococcus aureus
GCA_014353225.1	JACSHR000000000		SAMN15862850	R35	Staphylococcus aureus
GCA_014353215.1	JACSHT000000000		SAMN15862847	R32	Staphylococcus aureus
GCA_014353195.1	JACSHP000000000		SAMN15862852	R37	Staphylococcus aureus
GCA_045570755.1	JBJJNP000000000		SAMN44253474	MRSA_02_Hy	Staphylococcus aureus
GCA_045570735.1	JBJJNO000000000		SAMN44253486	MRSA_14_Hy	Staphylococcus aureus
GCA_045801125.1	JBJJNN000000000		SAMN44253512	MRSA_40_Hy	Staphylococcus aureus

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