Pathogenic clinical isolates (ID 649713) - BioProject

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Accession: PRJNA649713 ID: 649713

Pathogenic clinical isolates

Northern Maine pathogenic clinical isolate genome sequencing and assembly

Antibiotic resistance is becoming more prevalent through horizontal gene transfer. More...

Accession	PRJNA649713
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Comparative Functional Genomics of Antibiotic-Susceptible and Antibiotic-Resistant Bacterial Pathogens" (Grant ID 5P20GM103423-16, National Institute of Health)
Submission	Registration date: 30-Jul-2020 University of Maine at Presque Isle
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	28
SRA Experiments	27
Other datasets
BioSample	28
Assembly	28

Assembly details:

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Assembly level

Number of Assemblies

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Total

28
28

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_014235605.1	JACJHH000000000	SAMN15689509	RHBSTW-00564	Enterobacter hormaechei
GCA_014235575.1	JACJHK000000000	SAMN15689506	RHBSTW-00564	Enterobacter hormaechei
GCA_014235565.1	JACJHI000000000	SAMN15689508	BW	Enterobacter hormaechei
GCA_014235615.1	JACJHJ000000000	SAMN15689507	I140	Enterobacter ludwigii
GCA_014235745.1	JACJHO000000000	SAMN15689502	HB37	Escherichia coli
GCA_014235705.1	JACJHQ000000000	SAMN15689500	EcPF15	Escherichia coli
GCA_014235685.1	JACJHN000000000	SAMN15689503	EcPF5	Escherichia coli
GCA_014235695.1	JACJHP000000000	SAMN15689501	SE6-1	Escherichia coli
GCA_014235665.1	JACJHM000000000	SAMN15689504	144	Escherichia coli
GCA_014235625.1	JACJHL000000000	SAMN15689505	WP3-S18-ESBL-09	Escherichia coli
GCA_014235545.1	JACJHG000000000	SAMN15689510	HNHF1	Klebsiella aerogenes
GCA_014235505.1	JACJHF000000000	SAMN15689511	HNHF1	Klebsiella aerogenes
GCA_014235485.1	JACJHD000000000	SAMN15689513	MS14393	Klebsiella pneumoniae
GCA_014235475.1	JACJHE000000000	SAMN15689512	90-17	Klebsiella pneumoniae
GCA_014235465.1	JACJHC000000000	SAMN15689514	E16KP0288	Klebsiella pneumoniae
GCA_014235445.1	JACJHB000000000	SAMN15689515	SMKP03	Klebsiella pneumoniae
GCA_014235425.1	JACJHA000000000	SAMN15689516	Kp8701	Klebsiella pneumoniae
GCA_014235385.1	JACJGZ000000000	SAMN15689517	LEMB11	Klebsiella variicola
GCA_014235375.1	JACJGX000000000	SAMN15689519	PA0750	Pseudomonas aeruginosa
GCA_014235365.1	JACJGY000000000	SAMN15689518	PA0750	Pseudomonas aeruginosa
GCA_014235305.1	JACJGU000000000	SAMN15689522	PA0750	Pseudomonas aeruginosa
GCA_014235295.1	JACJGW000000000	SAMN15689520	PA0750	Pseudomonas aeruginosa
GCA_014235285.1	JACJGV000000000	SAMN15689521	PA0750	Pseudomonas aeruginosa
GCA_014235215.1	JACJGQ000000000	SAMN15689526	MJ015	Staphylococcus aureus
GCA_014235205.1	JACJGS000000000	SAMN15689524	14505	Staphylococcus aureus
GCA_014235225.1	JACJGR000000000	SAMN15689525	14505	Staphylococcus aureus
GCA_014235275.1	JACJGT000000000	SAMN15689523	14505	Staphylococcus aureus
GCA_014235265.1	JACJGP000000000	SAMN15689527	NCTC10498	Stenotrophomonas maltophilia

SRA Data Details

Parameter	Value
Data volume, Gbases	46
Data volume, Mbytes	20857

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Pathogenic clinical isolates

Northern Maine pathogenic clinical isolate genome sequencing and assembly

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