ID 604020 - BioProject

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Accession: PRJNA604020 ID: 604020

Analysis of Virulence and Antimicrobial Resistance Gene Carriage in Staphylococcus aureus Infections in Equids

Seventy-two clinical Staphylococcus aureus isolates from equids (horses, donkeys, and a mule) were collected at Texas A&M University Veterinary Medical Teaching Hospital between 2007 and 2017. More...

Accession	PRJNA604020
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Little SV et al., "Analysis of Virulence and Antimicrobial Resistance Gene Carriage in Staphylococcus aureus Infections in Equids Using Whole-Genome Sequencing.", mSphere, 2021 Aug 25;6(4):e0019620
Grants	"Comparative Biomedical Research Training for Veterinarians" (Grant ID T32 OD011083, Office of the Director) "Comparative Biomedical Research Training for Veterinarians" (Grant ID T32 RR031229, National Center for Research Resources)
Submission	Registration date: 30-Jan-2020 Texas A&M University
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	73
WGS master	71
Genomic DNA	2
SRA Experiments	72
Protein Sequences	2589
Publications
PubMed	1
PMC	1
Other datasets
BioSample	72
Assembly	72

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

1
71
72

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_010364725.2		2	SAMN13948039	17-021	Staphylococcus aureus
GCA_010365075.1	JAAFMC000000000		SAMN13948067	47-073	Staphylococcus aureus
GCA_010363705.1	JAAFKQ000000000		SAMN13948105	67-090	Staphylococcus aureus
GCA_010363655.1	JAAFLD000000000		SAMN13948092	63-019	Staphylococcus aureus
GCA_010363635.1	JAAFLG000000000		SAMN13948089	61-017	Staphylococcus aureus
GCA_010363625.1	JAAFLB000000000		SAMN13948094	63-071	Staphylococcus aureus
GCA_010363645.1	JAAFKV000000000		SAMN13948100	66-064	Staphylococcus aureus
GCA_010365035.1	JAAFLY000000000		SAMN13948071	48-075	Staphylococcus aureus
GCA_010365025.1	JAAFLZ000000000		SAMN13948070	48-067	Staphylococcus aureus
GCA_010364995.1	JAAFMB000000000		SAMN13948068	47-087	Staphylococcus aureus
GCA_010364985.1	JAAFLV000000000		SAMN13948074	49-079	Staphylococcus aureus
GCA_010364965.1	JAAFMD000000000		SAMN13948066	46-023	Staphylococcus aureus
GCA_010364935.1	JAAFLS000000000		SAMN13948077	51-045	Staphylococcus aureus
GCA_010364925.1	JAAFMA000000000		SAMN13948069	48-001	Staphylococcus aureus
GCA_010364895.1	JAAFLU000000000		SAMN13948075	49-097	Staphylococcus aureus
GCA_010364875.1	JAAFLW000000000		SAMN13948073	49-069	Staphylococcus aureus
GCA_010364865.1	JAAFLT000000000		SAMN13948076	50-087	Staphylococcus aureus
GCA_010364845.1	JAAFLX000000000		SAMN13948072	49-063	Staphylococcus aureus
GCA_010364825.1	JAAFMY000000000		SAMN13948045	26-028	Staphylococcus aureus
GCA_010364805.1	JAAFLR000000000		SAMN13948078	51-058	Staphylococcus aureus
GCA_010364775.1	JAAFLN000000000		SAMN13948082	56-089	Staphylococcus aureus
GCA_010364755.1	JAAFLP000000000		SAMN13948080	54-016	Staphylococcus aureus
GCA_010364745.1	JAAFLQ000000000		SAMN13948079	53-100	Staphylococcus aureus
GCA_010364705.1	JAAFNH000000000		SAMN13948036	09-047	Staphylococcus aureus
GCA_010364665.1	JAAFNC000000000		SAMN13948041	17-036	Staphylococcus aureus
GCA_010364655.1	JAAFND000000000		SAMN13948040	17-024	Staphylococcus aureus
GCA_010364645.1	JAAFNB000000000		SAMN13948042	20-093	Staphylococcus aureus
GCA_010364615.1	JAAFMP000000000		SAMN13948054	30-061	Staphylococcus aureus
GCA_010364605.1	JAAFMQ000000000		SAMN13948053	30-020	Staphylococcus aureus
GCA_010364565.1	JAAFMN000000000		SAMN13948056	33-029	Staphylococcus aureus
GCA_010364555.1	JAAFMM000000000		SAMN13948057	33-036	Staphylococcus aureus
GCA_010364545.1	JAAFNA000000000		SAMN13948043	21-081	Staphylococcus aureus
GCA_010364525.1	JAAFMK000000000		SAMN13948059	36-009	Staphylococcus aureus
GCA_010364505.1	JAAFMO000000000		SAMN13948055	31-073	Staphylococcus aureus
GCA_010364465.1	JAAFMI000000000		SAMN13948061	36-057	Staphylococcus aureus
GCA_010364455.1	JAAFMJ000000000		SAMN13948060	36-054	Staphylococcus aureus
GCA_010364445.1	JAAFML000000000		SAMN13948058	36-004	Staphylococcus aureus
GCA_010364405.1	JAAFMH000000000		SAMN13948062	37-094	Staphylococcus aureus
GCA_010364415.1	JAAFMG000000000		SAMN13948063	38-086	Staphylococcus aureus
GCA_010364385.1	JAAFMF000000000		SAMN13948064	40-086	Staphylococcus aureus
GCA_010364355.1	JAAFME000000000		SAMN13948065	41-079	Staphylococcus aureus
GCA_010364345.1	JAAFLA000000000		SAMN13948095	63-083	Staphylococcus aureus
GCA_010364325.1	JAAFKZ000000000		SAMN13948096	64-065	Staphylococcus aureus
GCA_010364295.1	JAAFMX000000000		SAMN13948046	26-073	Staphylococcus aureus
GCA_010364285.1	JAAFMU000000000		SAMN13948049	29-001	Staphylococcus aureus
GCA_010364265.1	JAAFMR000000000		SAMN13948052	29-031	Staphylococcus aureus
GCA_010364235.1	JAAFKX000000000		SAMN13948098	66-021	Staphylococcus aureus
GCA_010364225.1	JAAFKW000000000		SAMN13948099	66-032	Staphylococcus aureus
GCA_010364185.1	JAAFKR000000000		SAMN13948104	67-049	Staphylococcus aureus
GCA_010364195.1	JAAFKS000000000		SAMN13948103	67-013	Staphylococcus aureus
GCA_010364165.1	JAAFKY000000000		SAMN13948097	65-098	Staphylococcus aureus
GCA_010364145.1	JAAFLE000000000		SAMN13948091	62-068	Staphylococcus aureus
GCA_010364125.1	JAAFKU000000000		SAMN13948101	66-067	Staphylococcus aureus
GCA_010364105.1	JAAFKO000000000		SAMN13948107	70-074	Staphylococcus aureus
GCA_010364075.1	JAAFLF000000000		SAMN13948090	62-008	Staphylococcus aureus
GCA_010364065.1	JAAFNG000000000		SAMN13948037	11-028	Staphylococcus aureus
GCA_010364035.1	JAAFKP000000000		SAMN13948106	68-009	Staphylococcus aureus
GCA_010364015.1	JAAFKT000000000		SAMN13948102	66-100	Staphylococcus aureus
GCA_010364005.1	JAAFNF000000000		SAMN13948038	11-038	Staphylococcus aureus
GCA_010363945.1	JAAFLM000000000		SAMN13948083	57-034	Staphylococcus aureus
GCA_010363935.1	JAAFMW000000000		SAMN13948047	28-062	Staphylococcus aureus
GCA_010363925.1	JAAFMS000000000		SAMN13948051	29-021	Staphylococcus aureus
GCA_010363905.1	JAAFLO000000000		SAMN13948081	54-075	Staphylococcus aureus
GCA_010363915.1	JAAFLL000000000		SAMN13948084	58-006	Staphylococcus aureus
GCA_010363845.1	JAAFLH000000000		SAMN13948088	60-073	Staphylococcus aureus
GCA_010363835.1	JAAFLK000000000		SAMN13948085	59-071	Staphylococcus aureus
GCA_010363815.1	JAAFLJ000000000		SAMN13948086	60-016	Staphylococcus aureus
GCA_010363825.1	JAAFMZ000000000		SAMN13948044	26-006	Staphylococcus aureus
GCA_010363805.1	JAAFMV000000000		SAMN13948048	28-091	Staphylococcus aureus
GCA_010363755.1	JAAFLI000000000		SAMN13948087	60-070	Staphylococcus aureus
GCA_010363735.1	JAAFLC000000000		SAMN13948093	63-045	Staphylococcus aureus
GCA_010363725.1	JAAFMT000000000		SAMN13948050	29-017	Staphylococcus aureus

SRA Data Details

Parameter	Value
Data volume, Gbases	13
Data volume, Mbytes	8593

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Analysis of Virulence and Antimicrobial Resistance Gene Carriage in Staphylococcus aureus Infections in Equids

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