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Accession: PRJNA532291 ID: 532291

Klebsiella, Escherichia, Enterobacter Genome sequencing and assembly

WGS of Carbapenem-resistant Gram-negative clinical isolates from Thailand

Illumina Reads

200 Samples

AccessionPRJNA532291
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 10-Apr-2019
JCVI
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)18955
WGS master198
SRA Experiments198
Protein Sequences1055412
Other datasets
BioSample198
Assembly198
Assembly details:
Assembly levelNumber of Assemblies
198
198
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_005146175.1ContigSWML00000000SAMN11399414
SIEC084
GCA_005146085.1ContigSWMN00000000SAMN11399449
SIEC109
GCA_005146165.1ContigSWMI00000000SAMN11399353
SIEC025
GCA_005146075.1ContigSWMD00000000SAMN11399369
SIEC011
GCA_005145995.1ContigSWMG00000000SAMN11399361
SIEC018
GCA_005145955.1ContigSWMB00000000SAMN11399340
SIEC035
GCA_005145985.1ContigSWME00000000SAMN11399366
SIEC015
GCA_004831135.1ContigSSZK00000000SAMN11399342
SIEC034
GCA_004831195.1ContigSSZJ00000000SAMN11399343
SIEC033
GCA_004832725.1ContigSTEB00000000SAMN11399743
SIEC197
GCA_004831015.1ContigSSYX00000000SAMN11399363
SIEC017
GCA_005145975.1ContigSWMC00000000SAMN11399323
SIKP010
GCA_005146005.1ContigSWMK00000000SAMN11399415
SIKP083
GCA_005146065.1ContigSWMF00000000SAMN11399364
SIKP016
GCA_005146105.1ContigSWMH00000000SAMN11399354
SIKP024
GCA_005146185.1ContigSWMM00000000SAMN11399450
SIKP108
GCA_005146095.1ContigSWMJ00000000SAMN11399344
SIKP032
GCA_004831155.1ContigSSZU00000000SAMN11399402
SIKP101
GCA_004831125.1ContigSSZA00000000SAMN11399357
SIKP021
GCA_004831115.1ContigSSZS00000000SAMN11419416
SIKP099
GCA_004831095.1ContigSSZG00000000SAMN11399348
SIKP029
GCA_004831065.1ContigSTAG00000000SAMN11399424
SIKP074
GCA_004831045.1ContigSSZC00000000SAMN11399355
SIKP023
GCA_004830985.1ContigSSYU00000000SAMN11399324
SIKP009
GCA_004831005.1ContigSSYY00000000SAMN11399360
SIKP019
GCA_004830945.1ContigSSYS00000000SAMN11399326
SIKP007
GCA_004830965.1ContigSSYR00000000SAMN11399327
SIKP006
GCA_004830915.1ContigSSYQ00000000SAMN11399328
SIKP005
GCA_004830925.1ContigSSZB00000000SAMN11399356
SIKP022
GCA_004830875.1ContigSSYK00000000SAMN11399374
SIKP044
GCA_004830885.1ContigSSYI00000000SAMN11399377
SIKP042
GCA_004830815.1ContigSSYP00000000SAMN11399329
SIKP004
GCA_004830845.1ContigSSYO00000000SAMN11399401
SIKP048
GCA_004830825.1ContigSSYJ00000000SAMN11399376
SIKP043
GCA_004830785.1ContigSSYF00000000SAMN11399335
SIKP039
GCA_004830755.1ContigSSYW00000000SAMN11399367
SIKP013
GCA_004830665.1ContigSTAT00000000SAMN11399409
SIKP089
GCA_004830745.1ContigSSYE00000000SAMN11399336
SIKP038
GCA_004830705.1ContigSSZH00000000SAMN11399347
SIKP030
GCA_004830715.1ContigSSZN00000000SAMN11399330
SIKP003
GCA_004830635.1ContigSSZI00000000SAMN11399346
SIKP031
GCA_004830685.1ContigSSZW00000000SAMN11399454
SIKP103
GCA_004830615.1ContigSTAI00000000SAMN11399422
SIKP076
GCA_004830605.1ContigSTAW00000000SAMN11419357
SIKP092
GCA_004830595.1ContigSSZR00000000SAMN11399404
SIKP098
GCA_004830525.1ContigSSZO00000000SAMN11419421
SIKP095
GCA_004830585.1ContigSTAP00000000SAMN11399413
SIKP085
GCA_004830515.1ContigSTAR00000000SAMN11399411
SIKP087
GCA_004830505.1ContigSSZV00000000SAMN11399455
SIKP102
GCA_004830495.1ContigSTAO00000000SAMN11399416
SIKP082
GCA_004830485.1ContigSSZZ00000000SAMN11399382
SIKP067
GCA_004830385.1ContigSSYD00000000SAMN11399337
SIKP037
GCA_004830395.1ContigSSYT00000000SAMN11399325
SIKP008
GCA_004830435.1ContigSSYZ00000000SAMN11399359
SIKP020
GCA_004830405.1ContigSSYM00000000SAMN11399372
SIKP046
GCA_004830275.1ContigSSYV00000000SAMN11399368
SIKP012
GCA_004830365.1ContigSSYG00000000SAMN11399334
SIKP040
GCA_004830375.1ContigSTAK00000000SAMN11399420
SIKP078
GCA_004830305.1ContigSSYN00000000SAMN11399371
SIKP047
GCA_004830265.1ContigSSYL00000000SAMN11399373
SIKP045
GCA_004830285.1ContigSSYC00000000SAMN11399339
SIKP036
GCA_004830295.1ContigSSYH00000000SAMN11399333
SIKP041
GCA_004832685.1ContigSTEK00000000SAMN11399505
SIKP165
GCA_004832765.1ContigSTDK00000000SAMN11399439
SIKP119
GCA_004832745.1ContigSTDJ00000000SAMN11399440
SIKP118
GCA_004832665.1ContigSTDD00000000SAMN11399446
SIKP112
GCA_004832695.1ContigSTDR00000000SAMN11399728
SIKP187
GCA_004832655.1ContigSTDC00000000SAMN11399447
SIKP111
GCA_004832595.1ContigSTCQ00000000SAMN11399469
SIKP149
GCA_004832575.1ContigSTEH00000000SAMN11399456
SIKP162
GCA_004832625.1ContigSTCI00000000SAMN11399477
SIKP140
GCA_004832555.1ContigSTDV00000000SAMN11399723
SIKP191
GCA_004832525.1ContigSTCC00000000SAMN11399483
SIKP134
GCA_004832565.1ContigSTCB00000000SAMN11399484
SIKP133
GCA_004832475.1ContigSTCH00000000SAMN11399478
SIKP139
GCA_004832465.1ContigSTCF00000000SAMN11399480
SIKP137
GCA_004832485.1ContigSTCA00000000SAMN11399485
SIKP132
GCA_004832455.1ContigSTCM00000000SAMN11399473
SIKP144
GCA_004832445.1ContigSTCL00000000SAMN11399474
SIKP143
GCA_004832355.1ContigSTCX00000000SAMN11399453
SIKP104
GCA_004832375.1ContigSTDL00000000SAMN11399438
SIKP120
GCA_004832385.1ContigSTCJ00000000SAMN11399476
SIKP141
GCA_004832315.1ContigSTDZ00000000SAMN11399745
SIKP195
GCA_004832395.1ContigSTCP00000000SAMN11399470
SIKP147
GCA_004832265.1ContigSTCS00000000SAMN11399467
SIKP151
GCA_004832275.1ContigSTEA00000000SAMN11399744
SIKP196
GCA_004832285.1ContigSTDI00000000SAMN11399441
SIKP117
GCA_004832145.1ContigSTBJ00000000SAMN11399390
SIKP059
GCA_004831185.1ContigSTAV00000000SAMN11399407
SIKP091
GCA_004831275.1ContigSSZX00000000SAMN11399384
SIKP065
GCA_004831225.1ContigSSZM00000000SAMN11399331
SIKP002
GCA_004833905.1ContigSTEG00000000SAMN11399457
SIKP161
GCA_004833935.1ContigSTEZ00000000SAMN11399737
SIKP180
GCA_004833955.1ContigSTET00000000SAMN11399493
SIKP174
GCA_004833925.1ContigSTFA00000000SAMN11399736
SIKP181
GCA_004833895.1ContigSTEC00000000SAMN11399741
SIKP198
GCA_004832255.1ContigSTBP00000000SAMN11399462
SIKP156
GCA_004832195.1ContigSTBL00000000SAMN11399388
SIKP061
GCA_004832165.1ContigSTBI00000000SAMN11399391
SIKP058
GCA_004832135.1ContigSTBA00000000SAMN11399399
SIKP050
GCA_004832175.1ContigSTBW00000000SAMN11399430
SIKP128
GCA_004832105.1ContigSTBN00000000SAMN11399386
SIKP063
GCA_004832095.1ContigSTBM00000000SAMN11399387
SIKP062
GCA_004832065.1ContigSTBE00000000SAMN11399395
SIKP054
GCA_004832025.1ContigSTBD00000000SAMN11399396
SIKP053
GCA_004832035.1ContigSTBT00000000SAMN11399433
SIKP125
GCA_004832005.1ContigSTBV00000000SAMN11399431
SIKP127
GCA_004831985.1ContigSTBX00000000SAMN11399429
SIKP129
GCA_004831955.1ContigSTBK00000000SAMN11399389
SIKP060
GCA_004831945.1ContigSTAZ00000000SAMN11399400
SIKP049
GCA_004831925.1ContigSTBF00000000SAMN11399394
SIKP055
GCA_004831865.1ContigSTAA00000000SAMN11399381
SIKP068
GCA_004831915.1ContigSTBC00000000SAMN11399397
SIKP052
GCA_004831845.1ContigSTAY00000000SAMN11399405
SIKP094
GCA_004831815.1ContigSSZQ00000000SAMN11419418
SIKP097
GCA_004831855.1ContigSTAN00000000SAMN11399417
SIKP081
GCA_004831835.1ContigSTAB00000000SAMN11399380
SIKP069
GCA_004831775.1ContigSSZP00000000SAMN11419420
SIKP096
GCA_004831755.1ContigSSZY00000000SAMN11399383
SIKP066
GCA_004831765.1ContigSTBU00000000SAMN11399432
SIKP126
GCA_004831695.1ContigSTBH00000000SAMN11399392
SIKP057
GCA_004831735.1ContigSTAS00000000SAMN11399410
SIKP088
GCA_004831675.1ContigSTBG00000000SAMN11399393
SIKP056
GCA_004831655.1ContigSTAJ00000000SAMN11399421
SIKP077
GCA_004831665.1ContigSTAX00000000SAMN11399406
SIKP093
GCA_004831635.1ContigSTAL00000000SAMN11399419
SIKP079
GCA_004831585.1ContigSTBB00000000SAMN11399398
SIKP051
GCA_004831595.1ContigSTAQ00000000SAMN11399412
SIKP086
GCA_004831565.1ContigSTBO00000000SAMN11399385
SIEB064
GCA_004831465.1ContigSTAU00000000SAMN11399408
SIKP090
GCA_004831525.1ContigSTBR00000000SAMN11399460
SIKP158
GCA_004831555.1ContigSTBS00000000SAMN11399459
SIKP159
GCA_004831495.1ContigSTBQ00000000SAMN11399461
SIKP157
GCA_004831485.1ContigSTAF00000000SAMN11399425
SIKP073
GCA_004831455.1ContigSTAM00000000SAMN11399418
SIKP080
GCA_004831425.1ContigSTAE00000000SAMN11399426
SIKP072
GCA_004831365.1ContigSSZT00000000SAMN11399403
SIKP100
GCA_004831405.1ContigSSZE00000000SAMN11399351
SIKP027
GCA_004831385.1ContigSTAD00000000SAMN11399378
SIKP071
GCA_004831355.1ContigSTAH00000000SAMN11399423
SIKP075
GCA_004831325.1ContigSSZL00000000SAMN11399332
SIKP001
GCA_004831285.1ContigSTAC00000000SAMN11399379
SIKP070
GCA_004831315.1ContigSSZD00000000SAMN11399352
SIKP026
GCA_004831255.1ContigSSZF00000000SAMN11399350
SIKP028
GCA_004833175.1ContigSTEI00000000SAMN11399508
SIKP163
GCA_004833275.1ContigSTEW00000000SAMN11399489
SIKP177
GCA_004833185.1ContigSTDS00000000SAMN11399727
SIKP188
GCA_004833205.1ContigSTEV00000000SAMN11399491
SIKP176
GCA_004833105.1ContigSTCW00000000SAMN11399463
SIKP155
GCA_004833165.1ContigSTCT00000000SAMN11399466
SIKP152
GCA_004833085.1ContigSTDP00000000SAMN11399434
SIKP124
GCA_004832985.1ContigSTCO00000000SAMN11399471
SIKP146
GCA_004833115.1ContigSTDM00000000SAMN11399437
SIKP121
GCA_004833045.1ContigSTEP00000000SAMN11399498
SIKP170
GCA_004833075.1ContigSTCU00000000SAMN11399465
SIKP153
GCA_004833005.1ContigSTDH00000000SAMN11399442
SIKP116
GCA_004832975.1ContigSTCR00000000SAMN11399468
SIKP150
GCA_004833015.1ContigSTCZ00000000SAMN11399452
SIKP106
GCA_004832855.1ContigSTEU00000000SAMN11399492
SIKP175
GCA_004832905.1ContigSTDX00000000SAMN11399715
SIKP193
GCA_004832955.1ContigSTCN00000000SAMN11399472
SIKP145
GCA_004832915.1ContigSTCD00000000SAMN11399482
SIKP135
GCA_004832895.1ContigSTBZ00000000SAMN11399427
SIKP131
GCA_004832775.1ContigSTEL00000000SAMN11399504
SIKP166
GCA_004832865.1ContigSTBY00000000SAMN11399428
SIKP130
GCA_004832825.1ContigSTEY00000000SAMN11399486
SIKP179
GCA_004832805.1ContigSTEX00000000SAMN11399488
SIKP178
GCA_004833875.1ContigSTEO00000000SAMN11399499
SIKP169
GCA_004833835.1ContigSTFC00000000SAMN11399733
SIKP183
GCA_004833805.1ContigSTER00000000SAMN11399496
SIKP172
GCA_004833775.1ContigSTEM00000000SAMN11399502
SIKP167
GCA_004833785.1ContigSTDF00000000SAMN11399444
SIKP114
GCA_004833815.1ContigSTEQ00000000SAMN11399497
SIKP171
GCA_004833745.1ContigSTCV00000000SAMN11399464
SIKP154
GCA_004833705.1ContigSTFB00000000SAMN11399734
SIKP182
GCA_004833715.1ContigSTDY00000000SAMN11399713
SIKP194
GCA_004833685.1ContigSTEE00000000SAMN11399739
SIKP200
GCA_004833625.1ContigSTDE00000000SAMN11399445
SIKP113
GCA_004833695.1ContigSTCE00000000SAMN11399481
SIKP136
GCA_004833605.1ContigSTDG00000000SAMN11399443
SIKP115
GCA_004833615.1ContigSTDW00000000SAMN11399721
SIKP192
GCA_004833485.1ContigSTEJ00000000SAMN11399506
SIKP164
GCA_004833595.1ContigSTDU00000000SAMN11399725
SIKP190
GCA_004833585.1ContigSTCY00000000SAMN11419359
SIKP105
GCA_004833525.1ContigSTED00000000SAMN11399740
SIKP199
GCA_004833505.1ContigSTDQ00000000SAMN11399729
SIKP186
GCA_004833495.1ContigSTFD00000000SAMN11399732
SIKP184
GCA_004833385.1ContigSTEF00000000SAMN11399458
SIKP160
GCA_004833515.1ContigSTDB00000000SAMN11399448
SIKP110
GCA_004833425.1ContigSTDN00000000SAMN11399436
SIKP122
GCA_004833395.1ContigSTDT00000000SAMN11399726
SIKP189
GCA_004833405.1ContigSTDO00000000SAMN11399435
SIKP123
GCA_004833245.1ContigSTES00000000SAMN11399495
SIKP173
GCA_004833415.1ContigSTFE00000000SAMN11399731
SIKP185
GCA_004833215.1ContigSTEN00000000SAMN11399501
SIKP168
GCA_004833335.1ContigSTCG00000000SAMN11399479
SIKP138
GCA_004833305.1ContigSTDA00000000SAMN11399451
SIKP107
GCA_004833295.1ContigSTCK00000000SAMN11399475
SIKP142
SRA Data Details
ParameterValue
Data volume, Gbases159
Data volume, Mbytes70892

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