See
Genome Information for Strigops habroptila
Navigate Up
Navigate Across
Strigops habroptilus (Kakapo) Genome sequencing and assembly. Released from embargo April 29, 2021 in Rhie et al Nature. 2021 7856:737-746 and Dussex et al Cell Genomics 2021 https://doi.org/10.1016/j.xgen.2021.100002
| Accession | PRJNA510145 |
| Type | Umbrella project |
| Organism | Strigops habroptila[Taxonomy ID: 2489341] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops; Strigops habroptila |
| Grants | - "Promotion and science development" (Grant ID 1, Pacific BioSciences)
- "Molecular mechanisms of vocal learning" (Grant ID 1, Howard Hughes Medical Institute)
- "Promotion and science development" (Grant ID 1, Bionano Genomics)
|
| Submission | Registration date: 14-Dec-2018
Vertebrate Genomes Project |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 49899 |
| WGS master | 2 |
| Transcript | 49757 |
| SRA Experiments | 123 |
| Protein Sequences | 43613 |
| Publications |
| PubMed | 3 |
| PMC | 3 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds SRA or Trace Total |
2
1
1
4
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA489135 | Chromosomes | Strigops habroptila | Strigops habroptila (Kakapo) Genome sequencing and assembly, primary haplotype, v1 (Vertebrate Genomes Project) | | PRJNA489134 | Scaffolds | Strigops habroptila | Strigops habroptila (Kakapo) genome sequencing and assembly, alternate haplotype, v1 (Vertebrate Genomes Project) | | PRJNA558775 | Chromosomes | Strigops habroptila | Strigops habroptila isolate:Jane RefSeq Genome sequencing and assembly (NCBI) | | PRJNA1005977 | SRA or Trace | Strigops habroptila (Kakapo), bStrHab1, sequence data. | Strigops habroptila (Kakapo), bStrHab1, sequence data. (G10K) |
|