ID 497126 - BioProject

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Accession: PRJNA497126 ID: 497126

Pakistan and United States ICU transmission dynamics

Use selective bacterial culture to understand the identity, prevalence, persistence, and transmission of bacteria contaminating hospital intensive care unit surfaces in two countries.

Accession	PRJNA497126
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	D'Souza AW et al., "Spatiotemporal dynamics of multidrug resistant bacteria on intensive care unit surfaces.", Nat Commun, 2019 Oct 8;10(1):4569 Wardenburg KE et al., "Phenotypic and genotypic characterization of linezolid-resistant Enterococcus faecium from the USA and Pakistan.", J Antimicrob Chemother, 2019 Dec 1;74(12):3445-3452
Submission	Registration date: 16-Oct-2018 Washington University in St. Louis School of Medicine
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	31682
WGS master	282
Genomic DNA	49
SRA Experiments	303
Protein Sequences	1230621
Publications
PubMed	2
PMC	2
Other datasets
BioSample	293
Assembly	291

Assembly details:

Download

Assembly level

Number of Assemblies

8
1
271
11
291

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_003939885.1	RHXM00000000		SAMN10249205	270	Achromobacter aegrifaciens
GCA_003939895.1	RHXL00000000		SAMN10249198	AD_173	Achromobacter denitrificans
GCA_003940395.1	RHXX00000000		SAMN10249127	AB_389	Acinetobacter baumannii
GCA_003940135.1	RHZD00000000		SAMN10249089	AB_156	Acinetobacter baumannii
GCA_003940125.1	RHZC00000000		SAMN10249022	AB_159	Acinetobacter baumannii
GCA_003940105.1	RHZA00000000		SAMN10248970	AB_165	Acinetobacter baumannii
GCA_003940075.1	RHYP00000000		SAMN10249015	AB_235	Acinetobacter baumannii
GCA_003940065.1	RHYM00000000		SAMN10249021	AB_267	Acinetobacter baumannii
GCA_003940045.1	RHYF00000000		SAMN10249149	AB_363	Acinetobacter baumannii
GCA_003940015.1	RHXZ00000000		SAMN10249061	AB_382	Acinetobacter baumannii
GCA_003940005.1	RHXY00000000		SAMN10248955	AB_387	Acinetobacter baumannii
GCA_003939985.1	RHXW00000000		SAMN10249078	AB_390	Acinetobacter baumannii
GCA_003939955.1	RHXT00000000		SAMN10249073	AB_396	Acinetobacter baumannii
GCA_003939935.1	RHXS00000000		SAMN10249032	AB_397	Acinetobacter baumannii
GCA_003939925.1	RHXN00000000		SAMN10249026	AB_US_6	Acinetobacter baumannii
GCA_003940365.1	RHXV00000000		SAMN10249041	AB_391	Acinetobacter baumannii
GCA_003940335.1	RHXU00000000		SAMN10248978	AB_394	Acinetobacter baumannii
GCA_003940325.1	RHXQ00000000		SAMN10249063	AB_US_10	Acinetobacter baumannii
GCA_003939655.1	RHYW00000000		SAMN10249214	AB_186	Acinetobacter baumannii
GCA_003939645.1	RHYR00000000		SAMN10249102	AB_221	Acinetobacter baumannii
GCA_003939625.1	RHYK00000000		SAMN10248986	AB_331	Acinetobacter baumannii
GCA_003939595.1	RHYJ00000000		SAMN10249147	AB_347	Acinetobacter baumannii
GCA_003939585.1	RHYI00000000		SAMN10249083	AB_349	Acinetobacter baumannii
GCA_003939565.1	RHYH00000000		SAMN10248957	AB_353	Acinetobacter baumannii
GCA_003939545.1	RHYG00000000		SAMN10248941	AB_359	Acinetobacter baumannii
GCA_003939525.1	RHYE00000000		SAMN10249057	AB_364	Acinetobacter baumannii
GCA_003939505.1	RHYD00000000		SAMN10249093	AB_368	Acinetobacter baumannii
GCA_003939475.1	RHYB00000000		SAMN10248939	AB_374	Acinetobacter baumannii
GCA_003939465.1	RHYC00000000		SAMN10249029	AB_369	Acinetobacter baumannii
GCA_003939445.1	RHYA00000000		SAMN10249121	AB_381	Acinetobacter baumannii
GCA_003939415.1	RHXR00000000		SAMN10248960	AB_401	Acinetobacter baumannii
GCA_003939395.1	RHXP00000000		SAMN10249115	AB_US_1	Acinetobacter baumannii
GCA_003939385.1	RHXO00000000		SAMN10249084	AB_US_2	Acinetobacter baumannii
GCA_003941815.1	RIAI00000000		SAMN10249097	AB_025	Acinetobacter baumannii
GCA_003941795.1	RIAG00000000		SAMN10249010	AB_029	Acinetobacter baumannii
GCA_003941785.1	RIAH00000000		SAMN10249046	AB_026	Acinetobacter baumannii
GCA_003941735.1	RIAC00000000		SAMN10249035	AB_043	Acinetobacter baumannii
GCA_003941755.1	RIAB00000000		SAMN10249181	AB_053	Acinetobacter baumannii
GCA_003941715.1	RHZX00000000		SAMN10249066	AB_077	Acinetobacter baumannii
GCA_003941695.1	RHZW00000000		SAMN10249200	AB_083	Acinetobacter baumannii
GCA_003941645.1	RHZQ00000000		SAMN10248964	AB_097	Acinetobacter baumannii
GCA_003941685.1	RHZS00000000		SAMN10249004	AB_094	Acinetobacter baumannii
GCA_003941625.1	RHZN00000000		SAMN10249037	AB_102	Acinetobacter baumannii
GCA_003941615.1	RHZI00000000		SAMN10249186	AB_140	Acinetobacter baumannii
GCA_003941605.1	RIAM00000000		SAMN10249109	AB_002	Acinetobacter baumannii
GCA_003941585.1	RIAL00000000		SAMN10249086	AB_014	Acinetobacter baumannii
GCA_003941545.1	RIAK00000000		SAMN10249002	AB_020	Acinetobacter baumannii
GCA_003941525.1	RIAJ00000000		SAMN10249163	AB_023	Acinetobacter baumannii
GCA_003941515.1	RIAF00000000		SAMN10248940	AB_035	Acinetobacter baumannii
GCA_003941505.1	RIAE00000000		SAMN10249113	AB_036	Acinetobacter baumannii
GCA_003941485.1	RIAD00000000		SAMN10249077	AB_039	Acinetobacter baumannii
GCA_003941435.1	RIAA00000000		SAMN10249137	AB_056	Acinetobacter baumannii
GCA_003941415.1	RHZV00000000		SAMN10248953	AB_085	Acinetobacter baumannii
GCA_003941425.1	RHZZ00000000		SAMN10248975	AB_062	Acinetobacter baumannii
GCA_003941405.1	RHZY00000000		SAMN10249195	AB_074	Acinetobacter baumannii
GCA_003941385.1	RHZU00000000		SAMN10249105	AB_088	Acinetobacter baumannii
GCA_003941325.1	RHZP00000000		SAMN10249101	AB_098	Acinetobacter baumannii
GCA_003941315.1	RHZT00000000		SAMN10249072	AB_091	Acinetobacter baumannii
GCA_003941305.1	RHZM00000000		SAMN10249204	AB_104	Acinetobacter baumannii
GCA_003941285.1	RHZO00000000		SAMN10249085	AB_100	Acinetobacter baumannii
GCA_003941245.1	RHZL00000000		SAMN10248989	AB_107	Acinetobacter baumannii
GCA_003941295.1	RHZR00000000		SAMN10249210	AB_095	Acinetobacter baumannii
GCA_003941255.1	RHZK00000000		SAMN10249217	AB_115	Acinetobacter baumannii
GCA_003941195.1	RHZG00000000		SAMN10249024	AB_147	Acinetobacter baumannii
GCA_003941205.1	RHZH00000000		SAMN10249068	AB_145	Acinetobacter baumannii
GCA_003941185.1	RHZJ00000000		SAMN10248996	AB_126	Acinetobacter baumannii
GCA_003941145.1	RHZF00000000		SAMN10249177	AB_149	Acinetobacter baumannii
GCA_003941135.1	RHZB00000000		SAMN10249162	AB_161	Acinetobacter baumannii
GCA_003941125.1	RHZE00000000		SAMN10248937	AB_152	Acinetobacter baumannii
GCA_003941085.1	RHYY00000000		SAMN10249052	AB_170	Acinetobacter baumannii
GCA_003941095.1	RHYT00000000		SAMN10249027	AB_194	Acinetobacter baumannii
GCA_003941065.1	RHYS00000000		SAMN10248992	AB_203	Acinetobacter baumannii
GCA_003941015.1	RHYL00000000		SAMN10248990	AB_272	Acinetobacter baumannii
GCA_003941025.1	RHYQ00000000		SAMN10249074	AB_230	Acinetobacter baumannii
GCA_003940965.1	RHYZ00000000		SAMN10249114	AB_168	Acinetobacter baumannii
GCA_003940925.1	RHYN00000000		SAMN10249060	AB_261	Acinetobacter baumannii
GCA_003940915.1	RHYX00000000		SAMN10249016	AB_172	Acinetobacter baumannii
GCA_003940895.1	RHYV00000000		SAMN10249126	AB_191	Acinetobacter baumannii
GCA_003940875.1	RHYU00000000		SAMN10249064	AB_193	Acinetobacter baumannii
GCA_003940865.1	RHYO00000000		SAMN10249116	AB_258	Acinetobacter baumannii
GCA_003939325.2		7	SAMN10249157	AJ_082	Acinetobacter johnsonii
GCA_003940285.1	RHXE00000000		SAMN10249155	AJ_385	Acinetobacter johnsonii
GCA_003939355.2		3	SAMN10249224	AJ_068	Acinetobacter junii
GCA_003939335.2		2	SAMN10249206	AJ_351	Acinetobacter junii
GCA_003940305.1	RHXF00000000		SAMN10249226	AJ_356	Acinetobacter junii
GCA_003939835.1	RHXH00000000		SAMN10249166	AJ_243	Acinetobacter junii
GCA_004151415.2		11	SAMN10249049	AL_065	Acinetobacter lwoffii
GCA_003938595.1	RHXC00000000		SAMN10249103	AS_142	Acinetobacter soli
GCA_003938405.2		6	SAMN10248995	AV_175	Acinetobacter variabilis
GCA_003938225.2		1	SAMN10249222	393	Alcaligenes aquatilis
GCA_003939865.1	RHXK00000000		SAMN10249203	AF_174	Alcaligenes faecalis
GCA_003939305.1	RHXA00000000		SAMN10249134	AS_379	Atlantibacter subterranea
GCA_003940265.1	RHXB00000000		SAMN10248943	AS_373	Atlantibacter subterranea
GCA_003938425.1	RHWZ00000000		SAMN10249062	AS_383	Atlantibacter subterranea
GCA_003938605.1	RHWX00000000		SAMN10249201	357	Brevundimonas sp. 357
GCA_003937445.1	RHTD00000000		SAMN10249178	OA_244	Brucella anthropi
GCA_003937425.1	RHTC00000000		SAMN10249151	OA_392	Brucella anthropi
GCA_003938205.1	RHWV00000000		SAMN10249175	CF_355	Citrobacter farmeri
GCA_003937345.2		7	SAMN10249196	CF_324	Citrobacter freundii
GCA_003936775.1	RHRS00000000		SAMN10249212	PO_271	Ectopseudomonas oleovorans
GCA_003935845.1	RHPN00000000		SAMN10249043	WF_350	Empedobacter falsenii
GCA_003935165.1	RHPO00000000		SAMN10249129	WF_348	Empedobacter falsenii
GCA_003938165.1	RHWT00000000		SAMN10248983	EC_073	Enterobacter cloacae
GCA_003937295.2		7	SAMN10248993	EH_316	Enterobacter hormaechei
GCA_003937905.1	RHUQ00000000		SAMN10248969	EH_183	Enterobacter hormaechei
GCA_003937925.1	RHUN00000000		SAMN10249118	EH_360	Enterobacter hormaechei
GCA_003936525.1	RHUP00000000		SAMN10249150	EH_279	Enterobacter hormaechei
GCA_003936565.1	RHUR00000000		SAMN10249130	EH_057	Enterobacter hormaechei
GCA_003937285.1	RHUW00000000		SAMN10249023	EF_370	Enterococcus faecium
GCA_003937635.1	RHWK00000000		SAMN10249020	EF_028	Enterococcus faecium
GCA_003937555.1	RHUU00000000		SAMN10249143	EF_380	Enterococcus faecium
GCA_003936615.1	RHUX00000000		SAMN10249139	EF_367	Enterococcus faecium
GCA_003936605.1	RHVB00000000		SAMN10249189	EF_325	Enterococcus faecium
GCA_003936585.1	RHUV00000000		SAMN10248942	EF_375	Enterococcus faecium
GCA_003938135.1	RHWH00000000		SAMN10249011	EF_042	Enterococcus faecium
GCA_003938105.1	RHVV00000000		SAMN10249112	EF_120	Enterococcus faecium
GCA_003938005.1	RHVF00000000		SAMN10248938	EF_248	Enterococcus faecium
GCA_003938045.1	RHVU00000000		SAMN10248973	EF_127	Enterococcus faecium
GCA_003938065.1	RHVT00000000		SAMN10249106	EF_129	Enterococcus faecium
GCA_003937935.1	RHVA00000000		SAMN10249088	EF_334	Enterococcus faecium
GCA_003938035.1	RHVL00000000		SAMN10249091	EF_171	Enterococcus faecium
GCA_003938025.1	RHVP00000000		SAMN10249131	EF_155	Enterococcus faecium
GCA_003937355.1	RHWE00000000		SAMN10249079	EF_052	Enterococcus faecium
GCA_003937575.1	RHVR00000000		SAMN10249058	EF_139	Enterococcus faecium
GCA_003938515.1	RHWD00000000		SAMN10249182	EF_054	Enterococcus faecium
GCA_003938525.1	RHWG00000000		SAMN10248944	EF_048	Enterococcus faecium
GCA_003938495.1	RHVI00000000		SAMN10249031	EF_205	Enterococcus faecium
GCA_003938485.1	RHVH00000000		SAMN10249071	EF_231	Enterococcus faecium
GCA_003938505.1	RHVW00000000		SAMN10249142	EF_111	Enterococcus faecium
GCA_003938445.1	RHUZ00000000		SAMN10249087	EF_354	Enterococcus faecium
GCA_003938125.1	RHWA00000000		SAMN10249055	EF_092	Enterococcus faecium
GCA_003938395.1	RHVX00000000		SAMN10248979	EF_108	Enterococcus faecium
GCA_003938375.1	RHWJ00000000		SAMN10249190	EF_033	Enterococcus faecium
GCA_003938365.1	RHVQ00000000		SAMN10249122	EF_143	Enterococcus faecium
GCA_003938345.1	RHVN00000000		SAMN10248994	EF_166	Enterococcus faecium
GCA_003938305.1	RHVJ00000000		SAMN10249219	EF_181	Enterococcus faecium
GCA_003938275.1	RHVE00000000		SAMN10249067	EF_264	Enterococcus faecium
GCA_003938285.1	RHVG00000000		SAMN10249039	EF_238	Enterococcus faecium
GCA_003938265.1	RHVC00000000		SAMN10249158	EF_313	Enterococcus faecium
GCA_003965125.1	RXOX00000000		SAMN10249215	EF_292	Enterococcus faecium
GCA_003940245.1	RHWL00000000		SAMN10249104	EF_006	Enterococcus faecium
GCA_003940215.1	RHWB00000000		SAMN10249053	EF_086	Enterococcus faecium
GCA_003940205.1	RHWI00000000		SAMN10248976	EF_034	Enterococcus faecium
GCA_003940185.1	RHUY00000000		SAMN10248945	EF_358	Enterococcus faecium
GCA_003939805.1	RHWC00000000		SAMN10249047	EF_078	Enterococcus faecium
GCA_003939775.1	RHVY00000000		SAMN10249033	EF_103	Enterococcus faecium
GCA_003939765.1	RHVM00000000		SAMN10249145	EF_169	Enterococcus faecium
GCA_003939745.1	RHVK00000000		SAMN10248997	EF_176	Enterococcus faecium
GCA_003939705.1	RHUS00000000		SAMN10248949	EF_386	Enterococcus faecium
GCA_003939215.1	RHWF00000000		SAMN10249098	EF_051	Enterococcus faecium
GCA_003939205.1	RHVZ00000000		SAMN10249096	EF_101	Enterococcus faecium
GCA_003939175.1	RHVD00000000		SAMN10248968	EF_275	Enterococcus faecium
GCA_003939165.1	RHVO00000000		SAMN10249045	EF_157	Enterococcus faecium
GCA_003939145.1	RHUT00000000		SAMN10249006	EF_384	Enterococcus faecium
GCA_003940995.1	RHVS00000000		SAMN10249034	EF_132	Enterococcus faecium
GCA_003937915.1	RHUM00000000		SAMN10248984	198	Erwinia sp. 198
GCA_003939275.1	RHWR00000000		SAMN10249191	EC_212	Escherichia coli
GCA_003939265.1	RHWS00000000		SAMN10249110	EC_119	Escherichia coli
GCA_003939245.1	RHWO00000000		SAMN10249197	EC_340	Escherichia coli
GCA_003939825.1	RHWM00000000		SAMN10248954	EC_US_18	Escherichia coli
GCA_003937655.1	RHWP00000000		SAMN10249169	EC_337	Escherichia coli
GCA_003937625.1	RHWN00000000		SAMN10249152	EC_US_14	Escherichia coli
GCA_003938155.1	RHWQ00000000		SAMN10248947	EC_219	Escherichia coli
GCA_003938585.1	RHWU00000000		SAMN10248974	EC_071	Escherichia coli
GCA_003937225.1	RHUL00000000		SAMN10249193	KO_365	Klebsiella oxytoca
GCA_003937135.2		5	SAMN10249009	KP_160	Klebsiella pneumoniae
GCA_003937205.1	RHUC00000000		SAMN10249081	KP_093	Klebsiella pneumoniae
GCA_003937125.1	RHTW00000000		SAMN10248935	KP_136	Klebsiella pneumoniae
GCA_003937185.1	RHTY00000000		SAMN10248999	KP_123	Klebsiella pneumoniae
GCA_003937145.1	RHTX00000000		SAMN10249170	KP_135	Klebsiella pneumoniae
GCA_003937075.1	RHTR00000000		SAMN10249007	KP_195	Klebsiella pneumoniae
GCA_003937105.1	RHTS00000000		SAMN10248952	KP_184	Klebsiella pneumoniae
GCA_003937025.1	RHTM00000000		SAMN10249119	KP_301	Klebsiella pneumoniae
GCA_003937035.1	RHTO00000000		SAMN10249030	KP_241	Klebsiella pneumoniae
GCA_003937065.1	RHTP00000000		SAMN10249172	KP_215	Klebsiella pneumoniae
GCA_003937235.1	RHUE00000000		SAMN10249156	KP_084	Klebsiella pneumoniae
GCA_003937245.1	RHUF00000000		SAMN10248966	KP_063	Klebsiella pneumoniae
GCA_003937005.1	RHTF00000000		SAMN10248967	KP_346	Klebsiella pneumoniae
GCA_003936475.1	RHUB00000000		SAMN10248951	KP_109	Klebsiella pneumoniae
GCA_003936465.1	RHUA00000000		SAMN10249225	KP_116	Klebsiella pneumoniae
GCA_003936365.1	RHTJ00000000		SAMN10248982	KP_317	Klebsiella pneumoniae
GCA_003936435.1	RHTZ00000000		SAMN10249080	KP_121	Klebsiella pneumoniae
GCA_003936425.1	RHTQ00000000		SAMN10249000	KP_208	Klebsiella pneumoniae
GCA_003936375.1	RHTN00000000		SAMN10249146	KP_280	Klebsiella pneumoniae
GCA_003936505.1	RHUD00000000		SAMN10249108	KP_089	Klebsiella pneumoniae
GCA_003936515.1	RHUK00000000		SAMN10249050	KP_017	Klebsiella pneumoniae
GCA_003938235.1	RHUJ00000000		SAMN10249153	KP_030	Klebsiella pneumoniae
GCA_003937565.1	RHUI00000000		SAMN10249092	KP_040	Klebsiella pneumoniae
GCA_003937525.1	RHUG00000000		SAMN10249207	KP_046	Klebsiella pneumoniae
GCA_003937535.1	RHUH00000000		SAMN10249025	KP_044	Klebsiella pneumoniae
GCA_003937475.1	RHTI00000000		SAMN10249141	KP_320	Klebsiella pneumoniae
GCA_003937455.1	RHTU00000000		SAMN10249056	KP_158	Klebsiella pneumoniae
GCA_003937465.1	RHTK00000000		SAMN10249038	KP_310	Klebsiella pneumoniae
GCA_003965135.1	RXOY00000000		SAMN10249123	KP_008	Klebsiella pneumoniae
GCA_003944905.1	RHTH00000000		SAMN10249192	KP_328	Klebsiella pneumoniae
GCA_003944885.1	RHTG00000000		SAMN10249165	KP_343	Klebsiella pneumoniae
GCA_003939115.1	RHTV00000000		SAMN10249138	KP_144	Klebsiella pneumoniae
GCA_003940165.1	RHTL00000000		SAMN10249090	KP_307	Klebsiella pneumoniae
GCA_003936335.1	RHTE00000000		SAMN10249082	KQ_146	Klebsiella quasipneumoniae
GCA_003937325.1	RHSG00000000		SAMN10249019	PA_201	Pandoraea apista
GCA_003936875.1	RHSH00000000		SAMN10249051	PA_200	Pandoraea apista
GCA_003936175.1	RHRY00000000		SAMN10249144	PD_192	Pantoea dispersa
GCA_003936755.2	RHRR00000000		SAMN10249213	PR_162	Providencia rettgeri
GCA_003939105.1	RHSN00000000		SAMN10249135	PA_178	Pseudomonas aeruginosa
GCA_003939695.1	RHSO00000000		SAMN10248991	PA_118	Pseudomonas aeruginosa
GCA_003939685.1	RHSM00000000		SAMN10249075	PA_179	Pseudomonas aeruginosa
GCA_003940675.1	RHTA00000000		SAMN10249160	PA_032	Pseudomonas aeruginosa
GCA_003940665.1	RHSU00000000		SAMN10249179	PA_061	Pseudomonas aeruginosa
GCA_003940635.1	RHSW00000000		SAMN10249069	PA_059	Pseudomonas aeruginosa
GCA_003940625.1	RHSC00000000		SAMN10249040	PA_289	Pseudomonas aeruginosa
GCA_003940585.1	RHSB00000000		SAMN10249211	PA_294	Pseudomonas aeruginosa
GCA_003940575.1	RHRZ00000000		SAMN10249117	PA_304	Pseudomonas aeruginosa
GCA_003944895.1	RHSX00000000		SAMN10249124	PA_058	Pseudomonas aeruginosa
GCA_003937375.1	RHSQ00000000		SAMN10249008	PA_114	Pseudomonas aeruginosa
GCA_003937395.1	RHSR00000000		SAMN10249065	PA_113	Pseudomonas aeruginosa
GCA_003936245.1	RHSK00000000		SAMN10249209	PA_182	Pseudomonas aeruginosa
GCA_003936295.1	RHSL00000000		SAMN10249018	PA_180	Pseudomonas aeruginosa
GCA_003936255.1	RHSE00000000		SAMN10249132	PA_283	Pseudomonas aeruginosa
GCA_003936235.1	RHSA00000000		SAMN10248962	PA_298	Pseudomonas aeruginosa
GCA_003936225.1	RHSD00000000		SAMN10249059	PA_286	Pseudomonas aeruginosa
GCA_003935835.1	RHSV00000000		SAMN10249014	PA_060	Pseudomonas aeruginosa
GCA_003936835.1	RHSF00000000		SAMN10248958	PA_254	Pseudomonas aeruginosa
GCA_003936385.1	RHSZ00000000		SAMN10249128	PA_038	Pseudomonas aeruginosa
GCA_003936325.1	RHSS00000000		SAMN10249140	PA_112	Pseudomonas aeruginosa
GCA_003936965.1	RHSY00000000		SAMN10249094	PA_041	Pseudomonas aeruginosa
GCA_003936865.1	RHSI00000000		SAMN10249171	PA_187	Pseudomonas aeruginosa
GCA_003936935.1	RHSP00000000		SAMN10249173	PA_117	Pseudomonas aeruginosa
GCA_003936905.1	RHSJ00000000		SAMN10248972	PA_185	Pseudomonas aeruginosa
GCA_003936925.1	RHST00000000		SAMN10248961	PA_064	Pseudomonas aeruginosa
GCA_003936975.1	RHTB00000000		SAMN10249120	PA_011	Pseudomonas aeruginosa
GCA_003940565.1	RHRW00000000		SAMN10249180	PF_150	Pseudomonas fluorescens
GCA_003936165.1	RHRX00000000		SAMN10249076	PF_122	Pseudomonas fulva
GCA_003936185.1	RHRV00000000		SAMN10248950	PL_137	Pseudomonas luteola
GCA_003936815.1	RHRU00000000		SAMN10248956	PL_378	Pseudomonas luteola
GCA_003936805.1	RHRT00000000		SAMN10249223	PM_105	Pseudomonas moraviensis
GCA_003935525.1	RHQU00000000		SAMN10249202	PS_399	Pseudomonas saudiphocaensis
GCA_003935465.1	RHQP00000000		SAMN10249218	297	Pseudomonas sp. o96-267
GCA_003935455.1	RHQT00000000		SAMN10249161	o96	Pseudomonas sp. o96-267
GCA_003936645.1	RHQR00000000		SAMN10249164	p106	Pseudomonas sp. p106
GCA_003936655.1	RHQS00000000		SAMN10249148	p99	Pseudomonas sp. p99-361
GCA_003935475.1	RHQO00000000		SAMN10249107	361	Pseudomonas sp. p99-361
GCA_003935435.1	RHQQ00000000		SAMN10248985	s199	Pseudomonas sp. s199
GCA_003935425.1	RHQN00000000		SAMN10248971	v388	Pseudomonas sp. v388
GCA_003935755.1	RHPU00000000		SAMN10249048	SM_204	Serratia marcescens
GCA_003935135.1	RHPR00000000		SAMN10249099	SM_321	Serratia marcescens
GCA_003935355.1	RHQH00000000		SAMN10249042	SM_045	Serratia marcescens
GCA_003935145.1	RHPQ00000000		SAMN10249125	SM_362	Serratia marcescens
GCA_003935265.1	RHPX00000000		SAMN10249220	SM_188	Serratia marcescens
GCA_003935235.1	RHQC00000000		SAMN10249012	SM_079	Serratia marcescens
GCA_003935225.1	RHQA00000000		SAMN10248959	SM_153	Serratia marcescens
GCA_003935245.1	RHQD00000000		SAMN10249136	SM_076	Serratia marcescens
GCA_003935125.1	RHPV00000000		SAMN10249194	SM_196	Serratia marcescens
GCA_003935875.1	RHQB00000000		SAMN10249133	SM_090	Serratia marcescens
GCA_003935635.1	RHQI00000000		SAMN10249111	SM_037	Serratia marcescens
GCA_003935775.1	RHPW00000000		SAMN10248977	SM_190	Serratia marcescens
GCA_003935805.1	RHPY00000000		SAMN10249183	SM_164	Serratia marcescens
GCA_003935615.1	RHQE00000000		SAMN10249185	SM_069	Stenotrophomonas maltophilia
GCA_003935825.1	RHPZ00000000		SAMN10249154	SM_163	Stenotrophomonas maltophilia
GCA_003935155.1	RHPT00000000		SAMN10249184	SM_218	Stenotrophomonas maltophilia
GCA_003935735.1	RHPS00000000		SAMN10248948	SM_220	Stenotrophomonas maltophilia
GCA_003935335.1	RHQJ00000000		SAMN10249221	SM_031	Stenotrophomonas maltophilia
GCA_003935255.1	RHQF00000000		SAMN10249176	SM_055	Stenotrophomonas maltophilia
GCA_003935325.1	RHQG00000000		SAMN10249208	SM_047	Stenotrophomonas maltophilia
GCA_003935715.1	RHPP00000000		SAMN10248988	278	Stenotrophomonas sp. 278
GCA_003935545.1	RHQW00000000		SAMN10249036	PS_376	Stutzerimonas stutzeri
GCA_003935565.1	RHQY00000000		SAMN10248987	PS_257	Stutzerimonas stutzeri
GCA_003935575.1	RHQX00000000		SAMN10249187	PS_366	Stutzerimonas stutzeri
GCA_003935625.1	RHQV00000000		SAMN10249159	PS_377	Stutzerimonas stutzeri
GCA_003935965.1	RHRD00000000		SAMN10249168	PS_151	Stutzerimonas stutzeri
GCA_003935955.1	RHRA00000000		SAMN10249028	PS_211	Stutzerimonas stutzeri
GCA_003935925.1	RHRC00000000		SAMN10248998	PS_167	Stutzerimonas stutzeri
GCA_003936145.1	RHRQ00000000		SAMN10249054	PS_027	Stutzerimonas stutzeri
GCA_003936125.1	RHRO00000000		SAMN10249174	PS_072	Stutzerimonas stutzeri
GCA_003936075.1	RHRK00000000		SAMN10249188	PS_125	Stutzerimonas stutzeri
GCA_003936085.1	RHRJ00000000		SAMN10248980	PS_128	Stutzerimonas stutzeri
GCA_003936055.1	RHRF00000000		SAMN10249017	PS_134	Stutzerimonas stutzeri
GCA_003936035.1	RHRI00000000		SAMN10249070	PS_130	Stutzerimonas stutzeri
GCA_003935935.1	RHRB00000000		SAMN10249199	PS_197	Stutzerimonas stutzeri
GCA_003936025.1	RHRE00000000		SAMN10249100	PS_138	Stutzerimonas stutzeri
GCA_003936745.1	RHRN00000000		SAMN10248946	PS_075	Stutzerimonas stutzeri
GCA_003936675.1	RHQZ00000000		SAMN10249044	PS_234	Stutzerimonas stutzeri
GCA_003936705.1	RHRH00000000		SAMN10249095	PS_131	Stutzerimonas stutzeri
GCA_003936715.1	RHRL00000000		SAMN10248963	PS_110	Stutzerimonas stutzeri
GCA_003940545.1	RHRP00000000		SAMN10249001	PS_066	Stutzerimonas stutzeri
GCA_003940515.1	RHRM00000000		SAMN10248965	PS_087	Stutzerimonas stutzeri
GCA_003940495.1	RHRG00000000		SAMN10249003	PS_133	Stutzerimonas stutzeri
GCA_003940985.1	RIAN00000000		SAMN10248936	PS_050	Stutzerimonas stutzeri
GCA_003965105.1	RXOW00000000		SAMN10249013	PS_001	Stutzerimonas stutzeri
GCA_003935605.1	RHQL00000000		SAMN10248981	PX_177	Stutzerimonas xanthomarina
GCA_003935375.1	RHQM00000000		SAMN10249005	PX_067	Stutzerimonas xanthomarina
GCA_003935345.1	RHQK00000000		SAMN10249167	PX_371	Stutzerimonas xanthomarina

SRA Data Details

Parameter	Value
Data volume, Gbases	153
Data volume, Mbytes	64059

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Pakistan and United States ICU transmission dynamics

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