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Accession: PRJNA449871 ID: 449871

Helicobacter pylori

Complete genome sequences of Helicobacter pylori

See Genome Information for Helicobacter pylori
Identification of Helicobacter pylori virulence markers by comparative genomics.
AccessionPRJNA449871
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismHelicobacter pylori[Taxonomy ID: 210]
Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori
Grants
  • "Novel technologies as non-invasive tools for prognosis/diagnosis of gastric cancer" (Grant ID 1007/C/2013, Fundacio La Marato de TV3 (Catalonia))
SubmissionRegistration date: 13-Aug-2018
Facultat de Farmacia i Ciencies de l'Alimentacio; Universitat de Barcelona
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)3007
WGS master53
Protein Sequences78998
Other datasets
BioSample54
Assembly53
Assembly details:
Assembly levelNumber of Assemblies
19
34
53
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003382545.1ContigQDJN00000000SAMN08981264
B508A-S1
GCA_003382515.1ContigQDJM00000000SAMN08981265
B508A-T2A
GCA_003382505.1ContigQDJL00000000SAMN08981266
B508A-T4
GCA_003639265.1ContigQDJH00000000SAMN08981270
B657-A4
GCA_003639245.1ContigQDJG00000000SAMN08981271
B657-C1
GCA_003639215.1ScaffoldQDJE00000000SAMN08981273
B659-C2
GCA_003639165.1ContigQELB00000000SAMN08920036
B518
GCA_003639195.1ContigQELC00000000SAMN08920035
B319
GCA_003640145.1ContigQEHH00000000SAMN08999400
B126
GCA_003640105.1ContigQEHG00000000SAMN08999401
B274
GCA_003640155.1ContigQEHI00000000SAMN08999399
APR133
GCA_003640085.1ScaffoldQEGY00000000SAMN08999409
B368
GCA_003640095.1ContigQEHD00000000SAMN08999404
B344
GCA_003640055.1ScaffoldQEGW00000000SAMN08999411
B448
GCA_003640045.1ContigQEGU00000000SAMN08999413
B497A
GCA_003640025.1ContigQEGS00000000SAMN08999415
B572A
GCA_003639995.1ScaffoldQEGQ00000000SAMN08999417
B661A
GCA_003639985.1ContigQEGO00000000SAMN08999419
B712A
GCA_003639965.1ScaffoldQEHJ00000000SAMN08999398
AFR58
GCA_003639935.1ScaffoldQEHF00000000SAMN08999402
B297
GCA_003639915.1ContigQEHE00000000SAMN08999403
B314
GCA_003639905.1ScaffoldQEHC00000000SAMN08999405
B345
GCA_003639865.1ScaffoldQEHB00000000SAMN08999406
B360
GCA_003639845.1ContigQEHA00000000SAMN08999407
B362
GCA_003639785.1ScaffoldQEGV00000000SAMN08999412
B455
GCA_003639855.1ContigQEGZ00000000SAMN08999408
B366
GCA_003639805.1ContigQEGX00000000SAMN08999410
B400
GCA_003639795.1ContigQEGT00000000SAMN08999414
B528A
GCA_003639725.1ScaffoldQEGL00000000SAMN08999422
ECF139-B065
GCA_003639745.1ScaffoldQEGP00000000SAMN08999418
B679
GCA_003639735.1ContigQEGR00000000SAMN08999416
B630
GCA_003639675.1ContigQEGJ00000000SAMN08999424
JGF25
GCA_003639665.1ContigQEGM00000000SAMN08999421
CRM21
GCA_003639685.1ContigQEGN00000000SAMN08999420
BMG112
GCA_003639635.1ScaffoldQEGK00000000SAMN08999423
JDX15
GCA_003639615.1ScaffoldQEGI00000000SAMN08999425
JMM43
GCA_003639605.1ScaffoldQEGH00000000SAMN08999426
JSS185-B120
GCA_003639575.1ContigQEGG00000000SAMN08999427
MMV242
GCA_003639565.1ContigQEGF00000000SAMN08999428
MSL190
GCA_003639545.1ContigQEGD00000000SAMN08999430
VCT187-B122
GCA_003639525.1ScaffoldQDJR00000000SAMN08981260
B373
GCA_003639495.1ContigQDJQ00000000SAMN08981261
B444A
GCA_003639485.1ContigQDJP00000000SAMN08981262
B464A
GCA_003639455.1ContigQDJI00000000SAMN08981269
B657-A1
GCA_003639445.1ContigQDJF00000000SAMN08981272
B659-A1
GCA_003639425.1ContigQDJD00000000SAMN08981274
CRL122
GCA_003639405.1ContigQDJV00000000SAMN08981256
AAP164
GCA_003639385.1ContigQDJU00000000SAMN08981257
B247A
GCA_003639365.1ScaffoldQDJT00000000SAMN08981258
B335
GCA_003639335.1ScaffoldQDJS00000000SAMN08981259
B355
GCA_003639325.1ContigQDJO00000000SAMN08981263
B491
GCA_003639305.1ScaffoldQDJK00000000SAMN08981267
B529A
GCA_003639285.1ScaffoldQDJJ00000000SAMN08981268
B547F

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