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Accession: PRJNA449363 ID: 449363

Salmonella enterica subsp. enterica

Salmonella enterica subsp. enterica Genome sequencing and assembly

See Genome Information for Salmonella enterica
Salmonella enterica (non-Typhi) is one of the most common food-borne pathogens, primarily originating in agricultural animals, which can enter the food chain and cause salmonellosis in humans. More...
AccessionPRJNA449363
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica subsp. enterica[Taxonomy ID: 59201]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica
SubmissionRegistration date: 23-Apr-2018
Texas A&M University
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)9566
WGS master125
SRA Experiments125
Protein Sequences409217
Other datasets
BioSample126
Assembly125
Assembly details:
Assembly levelNumber of Assemblies
125
125
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_029523015.1ContigJAKRYC000000000SAMN24694407
ME2L-22-6
GCA_029522965.1ContigJAKRYB000000000SAMN24694408
ME2L-22-7
GCA_029522975.1ContigJAKRYA000000000SAMN24694409
ME2L-22-8
GCA_029522945.1ContigJAKRXZ000000000SAMN24694410
ME2L-22-9
GCA_029522935.1ContigJAKRXY000000000SAMN24694411
ME2L-22-10
GCA_029522915.1ContigJAKRXX000000000SAMN24694412
ME2L-22-11
GCA_029522895.1ContigJAKRXV000000000SAMN24694415
ME2L-22-14
GCA_029522855.1ContigJAKRXW000000000SAMN24694414
ME2L-22-13
GCA_029522845.1ContigJAKRXU000000000SAMN24694416
ME2L-22-15
GCA_029522825.1ContigJAKRXT000000000SAMN24694417
ME2L-22-16
GCA_029522815.1ContigJAKRXS000000000SAMN24694418
ME2L-22-17
GCA_029522715.1ContigJAKRXR000000000SAMN24694419
ME2L-22-18
GCA_029522655.1ContigJAKRXQ000000000SAMN24694420
ME2L-22-19
GCA_029522645.1ContigJAKRXN000000000SAMN24694423
ME2L-22-22
GCA_029522635.1ContigJAKRXP000000000SAMN24694421
ME2L-22-20
GCA_029522615.1ContigJAKRXO000000000SAMN24694422
ME2L-22-21
GCA_029522595.1ContigJAKRXM000000000SAMN24694424
ME2L-22-23
GCA_029522545.1ContigJAKRXL000000000SAMN24694425
ME2L-22-24
GCA_029522535.1ContigJAKRXK000000000SAMN24694426
ME2L-22-25
GCA_029522525.1ContigJAKRXJ000000000SAMN24694427
ME2L-22-26
GCA_029522515.1ContigJAKRXG000000000SAMN24694430
ME2L-22-29
GCA_029522495.1ContigJAKRXI000000000SAMN24694428
ME2L-22-27
GCA_029522465.1ContigJAKRXH000000000SAMN24694429
ME2L-22-28
GCA_029522445.1ContigJAKRXE000000000SAMN24694432
ME2L-22-31
GCA_029522435.1ContigJAKRXF000000000SAMN24694431
ME2L-22-30
GCA_029522415.1ContigJAKRXD000000000SAMN24694433
ME2L-22-32
GCA_029522385.1ContigJAKRXC000000000SAMN24694434
ME2L-22-33
GCA_029522355.1ContigJAKRXA000000000SAMN24694436
ME2L-22-35
GCA_029522345.1ContigJAKRXB000000000SAMN24694435
ME2L-22-34
GCA_029522335.1ContigJAKRWX000000000SAMN24694439
ME2L-22-38
GCA_029522315.1ContigJAKRWZ000000000SAMN24694437
ME2L-22-36
GCA_029522295.1ContigJAKRWY000000000SAMN24694438
ME2L-22-37
GCA_029522265.1ContigJAKRWV000000000SAMN24694441
ME2L-22-40
GCA_029522255.1ContigJAKRWW000000000SAMN24694440
ME2L-22-39
GCA_029522235.1ContigJAKRWU000000000SAMN24694442
ME2L-22-41
GCA_029522215.1ContigJAKRWT000000000SAMN24694443
ME2L-22-42
GCA_029523115.1ContigJAKRYF000000000SAMN24694404
ME2L-22-3
GCA_029523095.1ContigJAKRYH000000000SAMN24694402
ME2L-22-1
GCA_029523075.1ContigJAKRYG000000000SAMN24694403
ME2L-22-2
GCA_029523045.1ContigJAKRYD000000000SAMN24694406
ME2L-22-5
GCA_029523035.1ContigJAKRYE000000000SAMN24694405
ME2L-22-4
GCA_007280805.1ContigVKKR00000000SAMN12004681
A20HEB1
GCA_007280775.1ContigVKKP00000000SAMN12004685
A97HEB1
GCA_007280735.1ContigVKKQ00000000SAMN12004682
A22HEB21
GCA_007280705.1ContigVKKO00000000SAMN12004691
B70CEB11
GCA_007280655.1ContigVKKM00000000SAMN12004709
E6C1
GCA_007280715.1ContigVKKN00000000SAMN12004703
D51C1
GCA_007280695.1ContigVKKL00000000SAMN12004714
F28C1
GCA_007280645.1ContigVKKJ00000000SAMN12004716
F32H1
GCA_007280635.1ContigVKKK00000000SAMN12004715
F28H2
GCA_006443625.1ContigVFYC00000000SAMN12004697
C73CEB11
GCA_006443665.1ContigVFXP00000000SAMN12004712
E90C1
GCA_006443455.1ContigVFYG00000000SAMN12004693
C66CEB11
GCA_006443615.1ContigVFYK00000000SAMN12004688
B24HEB21
GCA_006443555.1ContigVFYL00000000SAMN12004687
B15CEB12
GCA_006443565.1ContigVFXZ00000000SAMN12004700
C73CEB23
GCA_006443535.1ContigVFXX00000000SAMN12004702
C93CEB11
GCA_006443525.1ContigVFXQ00000000SAMN12004711
E77C1
GCA_006443465.1ContigVFXW00000000SAMN12004704
D51HEB11
GCA_006443515.1ContigVFXY00000000SAMN12004701
C93C1
GCA_006443355.1ContigVFXO00000000SAMN12004713
E94H1
GCA_006443435.1ContigVFYB00000000SAMN12004698
C73CEB21
GCA_006443415.1ContigVFYJ00000000SAMN12004689
B3CEB21
GCA_006443445.1ContigVFYA00000000SAMN12004699
C73CEB22
GCA_006443375.1ContigVFYI00000000SAMN12004690
B53HEB11
GCA_006443345.1ContigVFXN00000000SAMN12004717
F93CEB21
GCA_006443305.1ContigVFYE00000000SAMN12004695
C72CEB21
GCA_006443185.1ContigVFYM00000000SAMN12004686
B10CEB11
GCA_006443335.1ContigVFYD00000000SAMN12004696
C72CEB22
GCA_006443285.1ContigVFYF00000000SAMN12004694
C72CEB11
GCA_006443255.1ContigVFXV00000000SAMN12004705
D55C1
GCA_006443245.1ContigVFXT00000000SAMN12004707
D79C1
GCA_006443175.1ContigVFYO00000000SAMN12004683
A46HEB11
GCA_006443235.1ContigVFYN00000000SAMN12004684
A50CEB2
GCA_006443135.1ContigVFXS00000000SAMN12004708
D97C1
GCA_006443195.1ContigVFXR00000000SAMN12004710
E76H1
GCA_006443145.1ContigVFXU00000000SAMN12004706
D67H1
GCA_006443635.1ContigVFYH00000000SAMN12004692
C44C1
GCA_003065445.1ContigQBGF00000000SAMN08897967
E58H1
GCA_003065455.1ContigQBGE00000000SAMN08897966
E55H1
GCA_003065585.1ContigQBGI00000000SAMN08897970
E64C1
GCA_003065555.1ContigQBGH00000000SAMN08897969
E62H2
GCA_003065545.1ContigQBGG00000000SAMN08897968
E61C1
GCA_003065515.1ContigQBGD00000000SAMN08897965
E53H1
GCA_003065505.1ContigQBGC00000000SAMN08897964
E51C1
GCA_003065135.1ContigQBFV00000000SAMN08897957
B51HEB1.2
GCA_003065125.1ContigQBFS00000000SAMN08897954
A65HEB1
GCA_003065325.1ContigQBGB00000000SAMN08897963
C55H1
GCA_003065305.1ContigQBGA00000000SAMN08897962
C12C1
GCA_003065275.1ContigQBFX00000000SAMN08897959
B70HEB1.1
GCA_003065265.1ContigQBFZ00000000SAMN08897961
C6C1
GCA_003065235.1ContigQBFY00000000SAMN08897960
B87HEB1.1
GCA_003065225.1ContigQBFT00000000SAMN08897955
B9HEB1.1
GCA_003065205.1ContigQBFW00000000SAMN08897958
B68HEB2.1
GCA_003065185.1ContigQBFU00000000SAMN08897956
B19CEB2.1
GCA_003067425.1ContigQBHM00000000SAMN08898000
F73C1
GCA_003067395.1ContigQBHK00000000SAMN08897998
F72H2
GCA_003067385.1ContigQBHL00000000SAMN08897999
F72H3
GCA_003067365.1ContigQBHJ00000000SAMN08897997
F72H1
GCA_003067345.1ContigQBHI00000000SAMN08897996
F70H3
GCA_003067325.1ContigQBHH00000000SAMN08897995
F70H2
GCA_003067295.1ContigQBHG00000000SAMN08897994
F70H1
GCA_003067285.1ContigQBHF00000000SAMN08897993
F65H3
GCA_003067255.1ContigQBHD00000000SAMN08897991
F65H1
GCA_003067245.1ContigQBHE00000000SAMN08897992
F65H2
GCA_003067215.1ContigQBHC00000000SAMN08897990
F64H3
GCA_003067205.1ContigQBHB00000000SAMN08897989
F64H2
GCA_003066945.1ContigQBHA00000000SAMN08897988
F64H1
GCA_003066925.1ContigQBGZ00000000SAMN08897987
F63H3
GCA_003066895.1ContigQBGY00000000SAMN08897986
F63H2
GCA_003066885.1ContigQBGX00000000SAMN08897985
F63H1
GCA_003066865.1ContigQBGW00000000SAMN08897984
F62C1
GCA_003066845.1ContigQBGV00000000SAMN08897983
E97C1
GCA_003065845.1ContigQBGU00000000SAMN08897982
E93C1
GCA_003065805.1ContigQBGS00000000SAMN08897980
E83C1
GCA_003065815.1ContigQBGT00000000SAMN08897981
E87C1
GCA_003065785.1ContigQBGR00000000SAMN08897979
E74C1
GCA_003065765.1ContigQBGP00000000SAMN08897977
E72C1
GCA_003065725.1ContigQBGQ00000000SAMN08897978
E72H1
GCA_003065735.1ContigQBGO00000000SAMN08897976
E69C1
GCA_003065705.1ContigQBGM00000000SAMN08897974
E68C2
GCA_003065685.1ContigQBGN00000000SAMN08897975
E68C3
GCA_003065665.1ContigQBGK00000000SAMN08897972
E67H1
GCA_003065645.1ContigQBGJ00000000SAMN08897971
E65H1
GCA_003065625.1ContigQBGL00000000SAMN08897973
E68C1
SRA Data Details
ParameterValue
Data volume, Gbases30
Data volume, Mbytes17437

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