U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA417344 ID: 417344

Escherichia coli

Escherichia coli Genome sequencing and assembly

See Genome Information for Escherichia coli
ESBL-EC from animal
AccessionPRJNA417344
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
PublicationsWu C et al., "Rapid rise of the ESBL and mcr-1 genes in Escherichia coli of chicken origin in China, 2008-2014.", Emerg Microbes Infect, 2018 Mar 14;7(1):30
Grants
  • "the National Natural Science Foundation of China" (Grant ID 31572568, National Science Foundation)
  • "the National Natural Science Foundation of China" (Grant ID 81661138002, National Science Foundation)
  • "the National Key Research and Development Program of China" (Grant ID 2016YFD0501301, AAA)
  • "the National Key Research and Development Program of China" (Grant ID 2016YFD0501304, AAA)
  • "the National Key Research and Development Program of China" (Grant ID 2016YFD0501305, AAA)
  • "National Key Basic Research Program of China" (Grant ID 2013CB127200, 973)
SubmissionRegistration date: 19-Mar-2018
China Aricultural University
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)41203
WGS master79
Publications
PubMed1
PMC1
Other datasets
BioSample81
Assembly79
Assembly details:
Assembly levelNumber of Assemblies
72
7
79
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003010375.1ScaffoldPGLO00000000SAMN07983251
11c13
GCA_003010385.1ScaffoldPGLP00000000SAMN07983250
LCD33
GCA_003010355.1ScaffoldPGLN00000000SAMN07983252
EZZ1-6
GCA_003010335.1ScaffoldPGLM00000000SAMN07983253
sc12-96
GCA_003010235.1ScaffoldPGLH00000000SAMN07983258
13f2
GCA_003010295.1ScaffoldPGLL00000000SAMN07983254
11a9
GCA_003010215.1ScaffoldPGLG00000000SAMN07983259
XF1-3g
GCA_003010285.1ScaffoldPGLK00000000SAMN07983255
ZZ1-5g
GCA_003010265.1ScaffoldPGLJ00000000SAMN07983256
GZC09-14
GCA_003010195.1ScaffoldPGLF00000000SAMN07983260
sc12-93
GCA_003010245.1ScaffoldPGLI00000000SAMN07983257
13b2
GCA_003010165.1ScaffoldPGLE00000000SAMN07983261
12f5
GCA_003010155.1ScaffoldPGLD00000000SAMN07983262
13h2
GCA_003010125.1ScaffoldPGLC00000000SAMN07983263
sc14-188
GCA_003010095.1ScaffoldPGLA00000000SAMN07983265
sc12-97
GCA_003010075.1ScaffoldPGKZ00000000SAMN07983266
zlp18
GCA_003010105.1ScaffoldPGLB00000000SAMN07983264
13h5
GCA_003010055.1ScaffoldPGKY00000000SAMN07983267
13j4
GCA_003009995.1ScaffoldPGKW00000000SAMN07983269
Eqsg1-6
GCA_003010005.1ContigPGKV00000000SAMN07983270
sc11-30
GCA_003010015.1ContigPGKX00000000SAMN07983268
sc12-98
GCA_003009975.1ScaffoldPGKU00000000SAMN07983271
sc11-29
GCA_003009915.1ScaffoldPGKS00000000SAMN07983273
13h3
GCA_003009715.1ScaffoldPJRM00000000SAMN08180604
12c5
GCA_003009935.1ContigPGKT00000000SAMN07983272
13h4
GCA_003009885.1ScaffoldPGKQ00000000SAMN07983276
sc12-91
GCA_003009875.1ScaffoldPGKP00000000SAMN07983277
CF10
GCA_003009725.1ScaffoldPKMY00000000SAMN08238410
8-19
GCA_003008745.1ScaffoldPGIU00000000SAMN07983326
YJC9
GCA_003008665.1ScaffoldPGIS00000000SAMN07983328
sc12-62
GCA_003008655.1ScaffoldPGIT00000000SAMN07983327
sc14-184
GCA_003009695.1ScaffoldPGKR00000000SAMN07983275
GZC11-6
GCA_003009675.1ScaffoldPGKO00000000SAMN07983278
11c5
GCA_003009635.1ScaffoldPGKN00000000SAMN07983279
12f7
GCA_003009645.1ScaffoldPGKM00000000SAMN07983280
GZC10-13
GCA_003009615.1ScaffoldPGKL00000000SAMN07983281
E8-1
GCA_003009585.1ContigPGKK00000000SAMN07983282
13h1
GCA_003009535.1ScaffoldPGKI00000000SAMN07983284
sc12-92
GCA_003009555.1ScaffoldPGKJ00000000SAMN07983283
12c2
GCA_003009505.1ScaffoldPGKG00000000SAMN07983286
8-2
GCA_003009545.1ContigPGKH00000000SAMN07983285
Eqsg1-4g
GCA_003009495.1ScaffoldPGKF00000000SAMN07983287
10f58
GCA_003009455.1ScaffoldPGKD00000000SAMN07983289
11a5
GCA_003009465.1ScaffoldPGKE00000000SAMN07983288
sc14-204
GCA_003009405.1ScaffoldPGKB00000000SAMN07983291
11a6
GCA_003009435.1ScaffoldPGKC00000000SAMN07983290
10f54
GCA_003009375.1ScaffoldPGKA00000000SAMN07983292
13j6
GCA_003009355.1ScaffoldPGJZ00000000SAMN07983293
12c1
GCA_003009365.1ScaffoldPGJY00000000SAMN07983294
NC3-1
GCA_003009255.1ScaffoldPGJS00000000SAMN07983300
XF1-3f
GCA_003009335.1ScaffoldPGJX00000000SAMN07983295
12b3
GCA_003009315.1ScaffoldPGJW00000000SAMN07983296
GZC09-12
GCA_003009265.1ScaffoldPGJU00000000SAMN07983298
GZC12-13
GCA_003009275.1ScaffoldPGJV00000000SAMN07983297
12c11
GCA_003009215.1ScaffoldPGJR00000000SAMN07983301
sc14-202
GCA_003009205.1ScaffoldPGJT00000000SAMN07983299
13f2-1
GCA_003009195.1ScaffoldPGJQ00000000SAMN07983302
ECRLC09
GCA_003009175.1ScaffoldPGJP00000000SAMN07983303
10f60
GCA_003009135.1ScaffoldPGJN00000000SAMN07983305
E11-3
GCA_003009145.1ScaffoldPGJO00000000SAMN07983304
sc12-100
GCA_003009115.1ScaffoldPTJL00000000SAMN07983306
EXF1-6 2013
GCA_003009055.1ScaffoldPGJL00000000SAMN07983308
11a2
GCA_003009095.1ScaffoldPGJM00000000SAMN07983307
GZC09-15
GCA_003009065.1ScaffoldPGJK00000000SAMN07983309
c83612
GCA_003009015.1ScaffoldPGJI00000000SAMN07983311
12c7
GCA_003009035.1ScaffoldPGJJ00000000SAMN07983310
Ehw1-5f
GCA_003008995.1ScaffoldPGJH00000000SAMN07983312
sc14-205
GCA_003008975.1ScaffoldPGJG00000000SAMN07983313
sc13-121
GCA_003008935.1ScaffoldPGJE00000000SAMN07983315
GZC13-7
GCA_003008945.1ContigPGJF00000000SAMN07983314
HDC9
GCA_003008915.1ScaffoldPGJD00000000SAMN07983316
sc11-25
GCA_003008895.1ScaffoldPGJC00000000SAMN07983317
12f4
GCA_003008875.1ScaffoldPGJB00000000SAMN07983318
sc12-99
GCA_003008855.1ScaffoldPGIZ00000000SAMN07983320
11f7
GCA_003008835.1ScaffoldPGJA00000000SAMN07983319
sc14-186
GCA_003008735.1ContigPGIW00000000SAMN07983323
GZC12-1
GCA_003008815.1ScaffoldPGIY00000000SAMN07983321
sc14-203
GCA_003008755.1ScaffoldPGIX00000000SAMN07983322
BBZ2-6
GCA_003008775.1ScaffoldPGIV00000000SAMN07983325
12c8

Supplemental Content

Recent activity

  • Escherichia coli
    Escherichia coli
    Escherichia coli Genome sequencing and assembly
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center