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Accession: PRJDB3392 ID: 341668

Spinacia oleracea (spinach)

RNA sequencing analysis of male and female plants from Spinacia oleracea.

See Genome Information for Spinacia oleracea
To construct the reference transcriptome for future spinach research on sex determination, mRNA sequencing analysis of male and female plants was carried out.
AccessionPRJDB3392
Data TypeTranscriptome or Gene expression
ScopeMonoisolate
OrganismSpinacia oleracea[Taxonomy ID: 3562]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia; Spinacia oleracea
PublicationsTakahata S et al., "Comparison of Spinach Sex Chromosomes with Sugar Beet Autosomes Reveals Extensive Synteny and Low Recombination at the Male-Determining Locus.", J Hered, 2016;107(7):679-685
Grants
  • "Genome Science" (Grant ID 221S0002, Japanese Ministry of Education, Culture, Sports, Science and Technology)
SubmissionRegistration date: 1-Sep-2016
Hokkaido University, Graduate School of Agriculture
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)189949
TSA master1
Transcript189948
SRA Experiments12
Publications
PubMed1
Other datasets
BioSample8
SRA Data Details
ParameterValue
Data volume, Gbases34
Data volume, Mbytes19914

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    Spinacia oleracea
    RNA sequencing analysis of male and female plants from Spinacia oleracea.
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