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Accession: PRJNA32507 ID: 32507

Escherichia coli D9 strain:D9

Reference genome for the Human Microbiome Project

See Genome Information for Escherichia coli
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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)
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2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).
9253 additional projects are related by organism.

Shigella sp. D9. A reference genome for the Human Microbiome Project.

AccessionPRJNA32507
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismEscherichia coli D9[Taxonomy ID: 556266]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli D9
SubmissionRegistration date: 18-Feb-2009
Broad Institute
- Broad Institute
- Broad Institute
Locus Tag PrefixSSJG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)129
WGS master1
SRA Experiments8
Protein Sequences4721
Other datasets
BioSample2
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000158395.1ScaffoldACDL00000000SAMN02463720
Escherichia coli D9
SRA Data Details
ParameterValue
Data volume, Mbases95
Data volume, Mbytes201

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