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Accession: PRJNA314303 ID: 314303

Mus musculus (house mouse)

Mouse popliteal lymph node transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [microRNA]

See Genome Information for Mus musculus
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This project is a component of the Modeling Host Responses to Understand Severe Human Virus Infections
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58 additional projects are components of the Modeling Host Responses to Understand Severe Human Virus Infections.
71985 additional projects are related by organism.
The purpose is to obtain samples for mRNA, miRNA, proteomics, lipidomics, metabolomics, and histopathology analysis in mouse cortex infected with wild-type West Nile virus (WNV; WNV-NY99 382), and mutant WNV-E218A (WNV-NY99 382 E218A 2 nt). More...
AccessionPRJNA314303; GEO: GSE78887
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsEisfeld AJ et al., "A compendium of multi-omics data illuminating host responses to lethal human virus infections.", Sci Data, 2024 Apr 2;11(1):328
SubmissionRegistration date: 4-Mar-2016
PNNL
RelevanceModel Organism
Project Data:
Resource NameNumber
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PubMed1
PMC1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots80730
Data volume, Processed Mbytes2
Data volume, Supplementary Mbytes80

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  • Mus musculus
    Mus musculus
    Mouse popliteal lymph node transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [microRNA]
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