Mus musculus (ID 309681) - BioProject

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Accession: PRJNA309681 ID: 309681

Mus musculus (house mouse)

Mouse cerebellum transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [WCB001_microRNA]

See Genome Information for Mus musculus

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This project is a component of the Modeling Host Responses to Understand Severe Human Virus Infections

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58 additional projects are components of the Modeling Host Responses to Understand Severe Human Virus Infections.

71985 additional projects are related by organism.

The purpose is to obtain samples for mRNA, miRNA, proteomics, lipidomics, metabolomics, and histopathology analysis in mouse cerebellum infected with wild-type West Nile virus (WNV; WNV-NY99 382), and mutant WNV-E218A (WNV-NY99 382 E218A 2 nt). More...

Accession	PRJNA309681; GEO: GSE77160
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications	Eisfeld AJ et al., "A compendium of multi-omics data illuminating host responses to lethal human virus infections.", Sci Data, 2024 Apr 2;11(1):328 Feng S et al., "Hypergraph models of biological networks to identify genes critical to pathogenic viral response.", BMC Bioinformatics, 2021 May 29;22(1):287
Submission	Registration date: 24-Jan-2016 PNNL
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Publications
PubMed	2
PMC	2
Other datasets
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Spots	93150
Data volume, Processed Mbytes	3
Data volume, Supplementary Mbytes	91

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Mus musculus (house mouse)

Mouse cerebellum transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [WCB001_microRNA]

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