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Accession: PRJNA30815 ID: 30815

A Genomic Encyclopedia of Bacteria and Archaea (GEBA)

The GEBA project is aimed at systematically filling in the gaps in sequencing along the bacterial and archaeal branches of the tree of life. Though the wide variety of microbial sequencing projects undertaken throughout the world has created a rich, diverse collection of microbial genomes, strong biases in what has been sequenced thus far are evident. This project represents the first systematic attempt to use the tree of life itself as a guide to sequencing target selection. JGI is beginning by collaborating on a pilot project with DSMZ.
AccessionPRJNA30815
TypeUmbrella project
SubmissionRegistration date: 30-Jul-2008
DOE Joint Genome Institute
Related Resources
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1261
WGS master38
Genomic DNA247
SRA Experiments1283
Capillary Traces (Trace Archive)1
Protein Sequences591219
Publications
PubMed139
PMC131
Other datasets
BioSample458
Assembly198
SRA Data Details
ParameterValue
Data volume, Gbases1,744
Data volume, Tbytes3.83
This project encompasses the following 207 sub-projects:
Project TypeNumber of Projects
Genome sequencing

160
9
25
4
9
207
BioProject
accession
Assembly
level
OrganismTitle
PRJNA32769 Complete genomeAcetohalobium arabaticum DSM 5501Halophilic acetogenic bacterium (US DOE Joint Genome Institute...)
PRJNA53351 Complete genomeAcetomicrobium mobile DSM 13181Acetomicrobium mobile DSM 13181 Genome sequencing (JGI)
PRJNA33685 Complete genomeAcidaminococcus fermentans DSM 20731Amino acid utilizing bacterium (US DOE Joint Genome Institute...)
PRJNA29525 Complete genomeAcidimicrobium ferrooxidans DSM 10331Iron-oxidizing thermophilic bacterium (US DOE Joint Genome Institute...)
PRJNA50863 ScaffoldsActinospica robiniae DSM 44927Actinospica robiniae DSM 44927 genome sequencing project (JGI)
List all 207 'Genome sequencing' projects...

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