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Accession: PRJNA301343 ID: 301343

Staphylococcus

Collection of Staphylococci isolates genome sequencing and assembly

WGS assembly of clinically and agriculturally isolated Staphylococcus strains
AccessionPRJNA301343
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismStaphylococcus[Taxonomy ID: 1279]
Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
SubmissionRegistration date: 28-Sep-2016
Tufts University
RelevanceMedical; Agricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1969
WGS master41
Protein Sequences102712
Other datasets
BioSample42
Assembly41
Assembly details:
Assembly levelNumber of Assemblies
25
16
41
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_004143695.1ScaffoldNMOI00000000SAMN07333888
876_5
GCA_001747965.1ScaffoldLNND00000000SAMN04244258
341_10
GCA_001747945.1ScaffoldLNDI00000000SAMN04244257
900_4
GCA_001747905.1ContigLNNC00000000SAMN04244256
BC3
GCA_001747895.1ContigLNNB00000000SAMN04244255
BC9
GCA_001747885.1ContigLNMZ00000000SAMN04244253
White_SAM
GCA_001747865.1ScaffoldLNMY00000000SAMN04244252
862_5
GCA_001747825.1ScaffoldLNQA00000000SAMN04244251
962_6
GCA_001747815.1ScaffoldLNPZ00000000SAMN04244250
947_12
GCA_001747805.1ScaffoldLNPY00000000SAMN04244248
908_10
GCA_001747785.1ScaffoldLNPX00000000SAMN04244247
738_7
GCA_001747995.1ContigLNNA00000000SAMN04244254
OffWhite_SAM
GCA_001747975.1ContigLNNE00000000SAMN04244259
396A
GCA_001747325.1ScaffoldLMYW00000000SAMN04244238
2262
GCA_001747315.1ScaffoldLMYU00000000SAMN04244236
9325
GCA_001747305.1ScaffoldLMYR00000000SAMN04244233
937
GCA_001747265.1ScaffoldLMYQ00000000SAMN04244232
7108
GCA_001747245.1ScaffoldLMYP00000000SAMN04244231
JB027
GCA_001747235.1ScaffoldLMYX00000000SAMN04244239
B2
GCA_001747225.1ScaffoldLMYV00000000SAMN04244237
1815
GCA_001747175.1ScaffoldLNPV00000000SAMN04244230
BWH2
GCA_001747155.1ScaffoldLMYT00000000SAMN04244235
BWH3
GCA_001747165.1ScaffoldLMYY00000000SAMN04244240
9556
GCA_001747145.1ScaffoldLMYS00000000SAMN04244234
889
GCA_001747485.1ScaffoldLMZK00000000SAMN04244243
9777
GCA_001747475.1ContigLMZJ00000000SAMN04244242
AC34
GCA_001747465.1ScaffoldLMZM00000000SAMN04244245
3201
GCA_001747655.1ContigLNPH00000000SAMN04244263
BC4
GCA_001747665.1ContigLNPG00000000SAMN04244264
725A_RS6
GCA_001747645.1ContigLNPI00000000SAMN04244262
735A
GCA_001747625.1ScaffoldLNPJ00000000SAMN04244261
CE6
GCA_001747585.1ContigLNPK00000000SAMN04244260
429A
GCA_001747575.1ScaffoldLMZL00000000SAMN04244244
1146
GCA_001747555.1ScaffoldLMZI00000000SAMN04244241
JBCB14
GCA_001747545.1ScaffoldLMZN00000000SAMN04244246
3751
GCA_001748045.1ContigLNPT00000000SAMN04244268
CHJ_154
GCA_001747705.1ContigLNPF00000000SAMN04244265
BC15
GCA_001748025.1ContigLNPR00000000SAMN04244269
733A
GCA_001747745.1ContigLNPU00000000SAMN04244270
BC10
GCA_001747725.1ContigLNPE00000000SAMN04244266
22B
GCA_001747735.1ContigLNPS00000000SAMN04244267
CJH_74

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    Collection of Staphylococci isolates genome sequencing and assembly
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