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Accession: PRJDB17244 ID: 1171205

Oryza sativa (Asian cultivated rice)

Comparative analysis of bacterial communities in two rice cultivars

See Genome Information for Oryza sativa
To compare the bacterial communities in seedlings of two rice cultivars, Nipponbare (a Japonica cultivar) and Nona-Bokra (an Indica cultivar), we conducted 16S rRNA gene amplicon sequencing using total DNA extracted from the 7-day-old seedlings of these cultivars. The sequencing was performed with an Illumina MiSeq sequencer.
AccessionPRJDB17244
Data TypeTargeted Locus (Loci)
ScopeEnvironment
OrganismOryza sativa[Taxonomy ID: 4530]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
SubmissionRegistration date: 9-Oct-2024
Institute of Agrobiological Sciences, National Agriculture and Food Research Organization
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Other datasets
BioSample2
SRA Data Details
ParameterValue
Data volume, Mbases121
Data volume, Mbytes81

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    Comparative analysis of bacterial communities in two rice cultivars
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