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Accession: PRJNA1150776 ID: 1150776

Escherichia coli of various origin

In-house collection of Escherichia coli isolates originating from various environments, countries and years.
AccessionPRJNA1150776
Data TypeGenome sequencing
ScopeMultispecies
SubmissionRegistration date: 22-Aug-2024
University of Veterinary Sciences Brno
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)159
Other datasets
BioSample162
Assembly159
Assembly details:
Assembly levelNumber of Assemblies
159
159
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_041537215.1ContigJBGORA000000000SAMN43296581
RM_3
GCA_041537145.1ContigJBGOQZ000000000SAMN43296582
RM_52
GCA_041537175.1ContigJBGORC000000000SAMN43296579
RM_13
GCA_041537125.1ContigJBGOQY000000000SAMN43296583
RM_6
GCA_041537105.1ContigJBGORB000000000SAMN43296580
RM_15
GCA_041520695.1ContigJBGOIW000000000SAMN43296687
1SIBe13mer
GCA_041520685.1ContigJBGOJA000000000SAMN43296683
1SIAe7mer
GCA_041520665.1ContigJBGOJC000000000SAMN43296681
1SIAe11mer
GCA_041520625.1ContigJBGOIY000000000SAMN43296685
1SIAk3mer
GCA_041520605.1ContigJBGOIU000000000SAMN43296689
1SIBe16mer
GCA_041520595.1ContigJBGOIV000000000SAMN43296688
1SIBe14mer
GCA_041520585.1ContigJBGOIZ000000000SAMN43296684
1SIAe9mer
GCA_041520565.1ContigJBGOIT000000000SAMN43296692
1SIBe19mer
GCA_041520485.1ContigJBGOIP000000000SAMN43296696
1SIBe3merA
GCA_041520505.1ContigJBGOIX000000000SAMN43296686
1SIBe10merA
GCA_041520515.1ContigJBGOIS000000000SAMN43296693
1SIBe20mer
GCA_041520495.1ContigJBGOIQ000000000SAMN43296695
1SIBe2merB
GCA_041520465.1ContigJBGOIO000000000SAMN43296697
1SIBe4mer
GCA_041520445.1ContigJBGOIL000000000SAMN43296700
1SIBe8mer
GCA_041520415.1ContigJBGOIK000000000SAMN43296701
1SIBk10cef
GCA_041520395.1ContigJBGOIJ000000000SAMN43296702
1SOAe10mer
GCA_041520365.1ContigJBGOIR000000000SAMN43296694
1SIBe2merA
GCA_041520345.1ContigJBGOHK000000000SAMN43296727
1SOBe7mer
GCA_041520355.1ContigJBGOHL000000000SAMN43296726
1SOBe5mer
GCA_041520325.1ContigJBGOHJ000000000SAMN43296728
1SOBe8mer
GCA_041520275.1ContigJBGOHS000000000SAMN43296719
1SOBe15mer
GCA_041520255.1ContigJBGOHP000000000SAMN43296722
1SOBe1merB
GCA_041520265.1ContigJBGOJB000000000SAMN43296682
1SIAe3mer
GCA_041520245.1ContigJBGOJD000000000SAMN43296680
1RUBk1mer
GCA_041520225.1ContigJBGOHO000000000SAMN43296723
1SOBe2mer
GCA_041519785.1ContigJBGOHI000000000SAMN43296729
1SOBk4cef
GCA_041520125.1ContigJBGOID000000000SAMN43296708
1SOAe18mer
GCA_041520135.1ContigJBGOHW000000000SAMN43296715
1SOBe11mer
GCA_041520115.1ContigJBGOHV000000000SAMN43296716
1SOBe12mer
GCA_041520095.1ContigJBGOIB000000000SAMN43296710
1SOAe5mer
GCA_041520075.1ContigJBGOHY000000000SAMN43296713
1SOAk3merA
GCA_041520055.1ContigJBGOHU000000000SAMN43296717
1SOBe13merA
GCA_041520025.1ContigJBGOIC000000000SAMN43296709
1SOAe3mer
GCA_041520015.1ContigJBGOHT000000000SAMN43296718
1SOBe13merB
GCA_041520005.1ContigJBGOHR000000000SAMN43296720
1SOBe16mer
GCA_041519985.1ContigJBGOHX000000000SAMN43296714
1SOAk3merB
GCA_041519915.1ContigJBGOHQ000000000SAMN43296721
1SOBe1merA
GCA_041519885.1ContigJBGOHN000000000SAMN43296724
1SOBe3mer
GCA_041519895.1ContigJBGOHM000000000SAMN43296725
1SOBe5cef
GCA_041519905.1ContigJBGOIG000000000SAMN43296705
1SOAe13mer
GCA_041519865.1ContigJBGOHH000000000SAMN43296730
1SOBk9mer
GCA_041522455.1ContigJBGONC000000000SAMN43296569
B0011851_A
GCA_041522395.1ContigJBGONB000000000SAMN43296570
B0019983
GCA_041522355.1ContigJBGOMY000000000SAMN43296573
B0021998_b
GCA_041522285.1ContigJBGOMW000000000SAMN43296575
BP22m
GCA_041522275.1ContigJBGOMV000000000SAMN43296576
DR_164_Bcip
GCA_041522255.1ContigJBGOMZ000000000SAMN43296572
B0019984_b
GCA_041522145.1ContigJBGOMR000000000SAMN43296585
DR_233a_CIP
GCA_041522175.1ContigJBGOMU000000000SAMN43296577
DR_173cip
GCA_041522135.1ContigJBGOMT000000000SAMN43296578
DR_41cip
GCA_041522115.1ContigJBGOMQ000000000SAMN43296586
DR_233b_CEF
GCA_041522075.1ContigJBGOMX000000000SAMN43296574
B0034407_a
GCA_041521975.1ContigJBGOMP000000000SAMN43296587
DR_249a_CIP
GCA_041521915.1ContigJBGOMN000000000SAMN43296590
DR_313_CIP
GCA_041521875.1ContigJBGOML000000000SAMN43296592
DR_353_CIP
GCA_041521885.1ContigJBGOMO000000000SAMN43296588
DR_296_CIP
GCA_041521895.1ContigJBGONA000000000SAMN43296571
B0019984_a
GCA_041521835.1ContigJBGOMS000000000SAMN43296584
DR_196a_CIP
GCA_041521795.1ContigJBGOMM000000000SAMN43296591
DR_348a_CIP
GCA_041521655.1ContigJBGOMF000000000SAMN43296598
DR255b-CIP
GCA_041521685.1ContigJBGOMI000000000SAMN43296595
DR201-CIP
GCA_041521595.1ContigJBGOMD000000000SAMN43296600
DR271-CIP
GCA_041521615.1ContigJBGOME000000000SAMN43296599
DR261-CIP
GCA_041521605.1ContigJBGOMK000000000SAMN43296593
DR_356_CEF
GCA_041521415.1ContigJBGOMC000000000SAMN43296601
DR337CIP
GCA_041521395.1ContigJBGOMG000000000SAMN43296597
DR216-CIP
GCA_041521175.1ContigJBGOII000000000SAMN43296703
1SOAe12merA
GCA_041521155.1ContigJBGOIN000000000SAMN43296698
1SIBe6merA
GCA_041521145.1ContigJBGOIH000000000SAMN43296704
1SOAe12merB
GCA_041521125.1ContigJBGOIF000000000SAMN43296706
1SOAe15merA
GCA_041521085.1ContigJBGOIA000000000SAMN43296711
1SOAe6mer
GCA_041521065.1ContigJBGOIM000000000SAMN43296699
1SIBe7mer
GCA_041521045.1ContigJBGOHZ000000000SAMN43296712
1SOAe9mer
GCA_041521025.1ContigJBGOIE000000000SAMN43296707
1SOAe17mer
GCA_041524205.1ContigJBGOKB000000000SAMN43296655
BP328e
GCA_041524185.1ContigJBGOKC000000000SAMN43296654
BP250e
GCA_041524165.1ContigJBGOKD000000000SAMN43296653
BP212e
GCA_041524145.1ContigJBGOJX000000000SAMN43296660
BP44h
GCA_041524115.1ContigJBGOKA000000000SAMN43296656
BP310Be
GCA_041524095.1ContigJBGOJV000000000SAMN43296662
BP77h
GCA_041524075.1ContigJBGOJU000000000SAMN43296663
BP98h
GCA_041524055.1ContigJBGOKE000000000SAMN43296652
BP207h
GCA_041524035.1ContigJBGOJY000000000SAMN43296658
BP366h
GCA_041524015.1ContigJBGOJZ000000000SAMN43296657
BP354Ae
GCA_041523995.1ContigJBGOJT000000000SAMN43296664
1HUAe6mer
GCA_041523975.1ContigJBGOJS000000000SAMN43296665
1HUAe7mer
GCA_041523955.1ContigJBGOJW000000000SAMN43296661
BP76h
GCA_041523925.1ContigJBGOJO000000000SAMN43296669
1RDAe3mer
GCA_041523915.1ContigJBGOJR000000000SAMN43296666
1RDAe11mer
GCA_041523895.1ContigJBGOJQ000000000SAMN43296667
1RDAe12mer
GCA_041523865.1ContigJBGOJG000000000SAMN43296677
1RUBe4mer
GCA_041523855.1ContigJBGOJP000000000SAMN43296668
1RDAe2merA
GCA_041523825.1ContigJBGOJL000000000SAMN43296672
1RDAe8merB
GCA_041523815.1ContigJBGOJN000000000SAMN43296670
1RDAe6merA
GCA_041523795.1ContigJBGOJH000000000SAMN43296676
1RUBe1mer
GCA_041523775.1ContigJBGOJF000000000SAMN43296678
1RUBe5mer
GCA_041523755.1ContigJBGOJK000000000SAMN43296673
1RDBe9mer
GCA_041523735.1ContigJBGOJJ000000000SAMN43296674
1RUAe1mer
GCA_041523715.1ContigJBGOJI000000000SAMN43296675
1RUAe3mer
GCA_041523695.1ContigJBGOJM000000000SAMN43296671
1RDAe8merA
GCA_041523675.1ContigJBGOJE000000000SAMN43296679
1RUBk10cef
GCA_041523655.1ContigJBGOMB000000000SAMN43296602
DR81CIP
GCA_041523635.1ContigJBGOLZ000000000SAMN43296604
SDR199a_CIP
GCA_041523615.1ContigJBGOMH000000000SAMN43296596
DR202a-CIP
GCA_041523585.1ContigJBGOMJ000000000SAMN43296594
DR_195cip
GCA_041523575.1ContigJBGOLW000000000SAMN43296607
SDR297a_COL
GCA_041523555.1ContigJBGOLV000000000SAMN43296608
61377
GCA_041523535.1ContigJBGOLX000000000SAMN43296606
SDR_2336_CIP
GCA_041522705.1ContigJBGOKX000000000SAMN43296633
WVB4h16
GCA_041522695.1ContigJBGOKH000000000SAMN43296649
BP136Ah
GCA_041522645.1ContigJBGOKJ000000000SAMN43296647
BP121h
GCA_041522635.1ContigJBGOKM000000000SAMN43296644
BP102e
GCA_041522595.1ContigJBGOKO000000000SAMN43296642
WVB6h6
GCA_041522565.1ContigJBGOKF000000000SAMN43296651
BP160Ah
GCA_041522525.1ContigJBGOKI000000000SAMN43296648
BP130h
GCA_041522495.1ContigJBGOKG000000000SAMN43296650
BP156h
GCA_041523475.1ContigJBGOLQ000000000SAMN43296614
491_1620m1
GCA_041523465.1ContigJBGOLS000000000SAMN43296611
64089
GCA_041523485.1ContigJBGOLT000000000SAMN43296610
63427
GCA_041523455.1ContigJBGOLY000000000SAMN43296605
SDR231a_CIP
GCA_041523425.1ContigJBGOLU000000000SAMN43296609
61589
GCA_041523405.1ContigJBGOMA000000000SAMN43296603
DR92_CIP
GCA_041523375.1ContigJBGOLR000000000SAMN43296612
1731m1
GCA_041523365.1ContigJBGOLP000000000SAMN43296615
5_65411
GCA_041523355.1ContigJBGOLO000000000SAMN43296616
6_65412
GCA_041523335.1ContigJBGOLN000000000SAMN43296617
66876
GCA_041523285.1ContigJBGOLI000000000SAMN43296622
68699
GCA_041523255.1ContigJBGOLG000000000SAMN43296624
HP26
GCA_041523265.1ContigJBGOLL000000000SAMN43296619
67858
GCA_041523275.1ContigJBGOLM000000000SAMN43296618
67450
GCA_041523235.1ContigJBGOLJ000000000SAMN43296621
68356
GCA_041523185.1ContigJBGOLC000000000SAMN43296628
WVB3e5
GCA_041523175.1ContigJBGOLH000000000SAMN43296623
68915
GCA_041523165.1ContigJBGOLA000000000SAMN43296630
WVB3h19
GCA_041523155.1ContigJBGOLD000000000SAMN43296627
V970H10
GCA_041523135.1ContigJBGOKZ000000000SAMN43296631
WVB4e5
GCA_041523115.1ContigJBGOLE000000000SAMN43296626
V782H2
GCA_041523085.1ContigJBGOLB000000000SAMN43296629
WVB3h12
GCA_041523065.1ContigJBGOLK000000000SAMN43296620
67991
GCA_041523045.1ContigJBGOKU000000000SAMN43296636
WVB4h3
GCA_041523035.1ContigJBGOLF000000000SAMN43296625
V415H4
GCA_041522985.1ContigJBGOKT000000000SAMN43296637
WVB4h6
GCA_041522995.1ContigJBGOKY000000000SAMN43296632
WVB4h14
GCA_041522965.1ContigJBGOKW000000000SAMN43296634
WVB4h17
GCA_041522945.1ContigJBGOKQ000000000SAMN43296640
WVB6h10
GCA_041522935.1ContigJBGOKN000000000SAMN43296643
BP100h
GCA_041522875.1ContigJBGOKL000000000SAMN43296645
BP104Ah
GCA_041522865.1ContigJBGOKP000000000SAMN43296641
WVB6h17
GCA_041522885.1ContigJBGOKR000000000SAMN43296639
WVB5e1
GCA_041522845.1ContigJBGOKV000000000SAMN43296635
WVB4h1
GCA_041522835.1ContigJBGOKK000000000SAMN43296646
BP105h
GCA_041522795.1ContigJBGOKS000000000SAMN43296638
WVB5e14
GCA_041537285.1ContigJBGOQW000000000SAMN43296691
1SIBe18merB
GCA_041537265.1ContigJBGOQX000000000SAMN43296690
1SIBe18merA

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