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Genome Information for Solanum nigrum
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This project collects the sequencing data and assemblies generated for Solanum nigrum, common name black nightshade, by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The data under this project are made available subject to the Darwin Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
| Accession | PRJEB78646 |
| Type | Umbrella project |
| Organism | Solanum nigrum[Taxonomy ID: 4112] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum nigrum |
| Submission | Registration date: 3-Aug-2024
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 40 |
| WGS master | 2 |
| Genomic DNA | 38 |
| SRA Experiments | 2 |
| Other datasets |
| BioSample | 2 |
| Assembly | 2 |
daSolNigr encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEB79342 | Scaffolds | Solanum nigrum | Solanum nigrum (black nightshade) genome assembly, daSolNigr1 haplotype 2 (WELLCOME SANGER INSTITUTE) | | PRJEB79341 | Chromosomes | Solanum nigrum | Solanum nigrum (black nightshade) genome assembly, daSolNigr1 haplotype 1 (WELLCOME SANGER INSTITUTE) |
|
| Other | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJEB78645 | Solanum nigrum | Solanum nigrum (black nightshade), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) |
|