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Accession: PRJNA1126828 ID: 1126828

Investigation of Salmonella in retail food in Shanghai

The epidemiology and colistin resistance of Salmonella in retail food in Shanghai were studied.
AccessionPRJNA1126828
Data TypeGenome sequencing
ScopeMultispecies
SubmissionRegistration date: 21-Jun-2024
Shanghai Jiao Tong Uniersity
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)45
Other datasets
BioSample45
Assembly45
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
22
23
45
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_043357075.1ScaffoldJBEUKL000000000SAMN41986920
SJTUF15568
Salmonella sp. SJTUF15568
GCA_043357025.1ContigJBEUKK000000000SAMN41986921
SJTUF15569
Salmonella sp. SJTUF15569
GCA_043357055.1ScaffoldJBEUKJ000000000SAMN41986922
SJTUF15570
Salmonella sp. SJTUF15570
GCA_043357015.1ScaffoldJBEUKI000000000SAMN41986923
SJTUF15571
Salmonella sp. SJTUF15571
GCA_043356975.1ContigJBEUKH000000000SAMN41986924
SJTUF15572
Salmonella sp. SJTUF15572
GCA_043356955.1ContigJBEUKG000000000SAMN41986925
SJTUF15573
Salmonella sp. SJTUF15573
GCA_043356965.1ScaffoldJBEUKF000000000SAMN41986926
SJTUF15574
Salmonella sp. SJTUF15574
GCA_043356935.1ContigJBEUKE000000000SAMN41986927
SJTUF15575
Salmonella sp. SJTUF15575
GCA_043356915.1ContigJBEUKD000000000SAMN41986928
SJTUF15576
Salmonella sp. SJTUF15576
GCA_043356885.1ScaffoldJBEUKC000000000SAMN41986929
SJTUF15577
Salmonella sp. SJTUF15577
GCA_043356845.1ContigJBEUKB000000000SAMN41986930
SJTUF15578
Salmonella sp. SJTUF15578
GCA_043356835.1ScaffoldJBEUKA000000000SAMN41986931
SJTUF15579
Salmonella sp. SJTUF15579
GCA_043356825.1ScaffoldJBEUJZ000000000SAMN41986932
SJTUF15580
Salmonella sp. SJTUF15580
GCA_043356775.1ScaffoldJBEUJY000000000SAMN41986933
SJTUF15581
Salmonella sp. SJTUF15581
GCA_043356815.1ScaffoldJBEUJX000000000SAMN41986934
SJTUF15582
Salmonella sp. SJTUF15582
GCA_043356645.1ContigJBEUJW000000000SAMN41986935
SJTUF15583
Salmonella sp. SJTUF15583
GCA_043356635.1ContigJBEUJV000000000SAMN41986936
SJTUF15584
Salmonella sp. SJTUF15584
GCA_043356695.1ScaffoldJBEUJU000000000SAMN41986937
SJTUF15585
Salmonella sp. SJTUF15585
GCA_043356605.1ContigJBEUJT000000000SAMN41986938
SJTUF15586
Salmonella sp. SJTUF15586
GCA_043356555.1ScaffoldJBEUJS000000000SAMN41986939
SJTUF15587
Salmonella sp. SJTUF15587
GCA_043356445.1ContigJBEUJR000000000SAMN41986940
SJTUF15588
Salmonella sp. SJTUF15588
GCA_043356355.1ContigJBEUJQ000000000SAMN41986941
SJTUF15589
Salmonella sp. SJTUF15589
GCA_043356495.1ContigJBEUJP000000000SAMN41986942
SJTUF15590
Salmonella sp. SJTUF15590
GCA_043356435.1ScaffoldJBEUJO000000000SAMN41986943
SJTUF15591
Salmonella sp. SJTUF15591
GCA_043356365.1ContigJBEUJN000000000SAMN41986944
SJTUF15592
Salmonella sp. SJTUF15592
GCA_043356305.1ScaffoldJBEUJM000000000SAMN41986945
SJTUF15593
Salmonella sp. SJTUF15593
GCA_043356295.1ContigJBEUJL000000000SAMN41986946
SJTUF15594
Salmonella sp. SJTUF15594
GCA_043356275.1ContigJBEUJK000000000SAMN41986947
SJTUF15595
Salmonella sp. SJTUF15595
GCA_043356265.1ScaffoldJBEUJJ000000000SAMN41986948
SJTUF15596
Salmonella sp. SJTUF15596
GCA_043356255.1ScaffoldJBEUJI000000000SAMN41986949
SJTUF15597
Salmonella sp. SJTUF15597
GCA_043356225.1ContigJBEUJH000000000SAMN41986950
SJTUF15598
Salmonella sp. SJTUF15598
GCA_043356175.1ContigJBEUJG000000000SAMN41986951
SJTUF15599
Salmonella sp. SJTUF15599
GCA_043356215.1ScaffoldJBEUJF000000000SAMN41986952
SJTUF15600
Salmonella sp. SJTUF15600
GCA_043356185.1ContigJBEUJE000000000SAMN41986953
SJTUF15601
Salmonella sp. SJTUF15601
GCA_043356155.1ScaffoldJBEUJD000000000SAMN41986954
SJTUF15602
Salmonella sp. SJTUF15602
GCA_043356135.1ContigJBEUJC000000000SAMN41986955
SJTUF15603
Salmonella sp. SJTUF15603
GCA_043356075.1ScaffoldJBEUJB000000000SAMN41986956
SJTUF15604
Salmonella sp. SJTUF15604
GCA_043356095.1ContigJBEUJA000000000SAMN41986957
SJTUF15605
Salmonella sp. SJTUF15605
GCA_043356085.1ScaffoldJBEUIZ000000000SAMN41986959
SJTUF15607
Salmonella sp. SJTUF15607
GCA_043356035.1ContigJBEUIY000000000SAMN41986960
SJTUF15608
Salmonella sp. SJTUF15608
GCA_043356055.1ScaffoldJBEUIX000000000SAMN41986961
SJTUF15609
Salmonella sp. SJTUF15609
GCA_043356005.1ScaffoldJBEUIW000000000SAMN41986962
SJTUF15610
Salmonella sp. SJTUF15610
GCA_043355995.1ContigJBEUIV000000000SAMN41986963
SJTUF15611
Salmonella sp. SJTUF15611
GCA_043355975.1ScaffoldJBEUIU000000000SAMN41986964
SJTUF15612
Salmonella sp. SJTUF15612
GCA_043355955.1ContigJBEUIT000000000SAMN41986965
SJTUF15613
Salmonella sp. SJTUF15613

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