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Accession: PRJNA1079283 ID: 1079283

Pempheris klunzingeri (Rough Bullseye) genome, fPemKlu1

See Genome Information for Pempheris klunzingeri
The Rough Bullseye (Pempheris klunzingeri) is endemic to Australia, found in temperate waters from Kangaroo Island (SA) to Shark bay (WA). This assembly was produced by Ocean Genomes. The assembly is based on PacBio HiFi long reads plus Dovetail Omni-C libraries and Illumina short reads. Data was generated at the Minderoo OceanOmics Centre at the University of Western Australia and assembled in house using a custom pipeline (https://github.com/Computational-Biology-OceanOmics) that follows Vertebrate Genomes Project workflows (https://vertebrategenomesproject.org/). The raw data and version 1 assembly are made available and should be credited in accordance with Ocean Genomes data use and sharing policies URL: https://www.minderoo.org/oceanomics. To discuss interim access, please contact [email protected].
AccessionPRJNA1079283
TypeUmbrella project
OrganismPempheris klunzingeri[Taxonomy ID: 3127111]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Acropomatiformes; Pempheridae; Pempheris; Pempheris klunzingeri
SubmissionRegistration date: 22-Feb-2024
Minderoo OceanOmics Centre at the University of Western Australia
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)50
WGS master2
SRA Experiments3
Other datasets
BioSample1
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases115
Data volume, Mbytes60477
This project encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
SRA or Trace
Total

2
1
3
BioProject
accession
Assembly
level
NameTitle
PRJNA1090818 ChromosomesPempheris klunzingeriPempheris klunzingeri (Rough Bullseye) genome, fPemKlu1, haplotype 1
PRJNA1090819 ChromosomesPempheris klunzingeriPempheris klunzingeri (Rough Bullseye) genome, fPemKlu1, haplotype 2
PRJNA1100241 SRA or TracePempheris klunzingeri (Rough Bullseye), fPemKlu1, sequence dataPempheris klunzingeri (Rough Bullseye), fPemKlu1, sequence data (Ocean Genomes)

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