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Genome Information for Pempheris klunzingeri
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28 additional projects are components of the Ocean Genomes (Minderoo OceanOmics Centre at University of the Western Australia).
The Rough Bullseye (Pempheris klunzingeri) is endemic to Australia, found in temperate waters from Kangaroo Island (SA) to Shark bay (WA). This assembly was produced by Ocean Genomes. The assembly is based on PacBio HiFi long reads plus Dovetail Omni-C libraries and Illumina short reads. Data was generated at the Minderoo OceanOmics Centre at the University of Western Australia and assembled in house using a custom pipeline (https://github.com/Computational-Biology-OceanOmics) that follows Vertebrate Genomes Project workflows (https://vertebrategenomesproject.org/). The raw data and version 1 assembly are made available and should be credited in accordance with Ocean Genomes data use and sharing policies URL: https://www.minderoo.org/oceanomics. To discuss interim access, please contact
[email protected].
Accession | PRJNA1079283 |
Type | Umbrella project |
Organism | Pempheris klunzingeri[Taxonomy ID: 3127111] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Acropomatiformes; Pempheridae; Pempheris; Pempheris klunzingeri |
Submission | Registration date: 22-Feb-2024 Minderoo OceanOmics Centre at the University of Western Australia |
Project Data:
Resource Name | Number of Links |
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Sequence data |
Nucleotide (total) | 50 |
WGS master | 2 |
SRA Experiments | 3 |
Other datasets |
BioSample | 1 |
Assembly | 2 |
This project encompasses the following 3 sub-projects:
Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes SRA or Trace Total | 2 1 3
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BioProject accession | Assembly level | Name | Title |
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PRJNA1090818 | Chromosomes | Pempheris klunzingeri | Pempheris klunzingeri (Rough Bullseye) genome, fPemKlu1, haplotype 1 | PRJNA1090819 | Chromosomes | Pempheris klunzingeri | Pempheris klunzingeri (Rough Bullseye) genome, fPemKlu1, haplotype 2 | PRJNA1100241 | SRA or Trace | Pempheris klunzingeri (Rough Bullseye), fPemKlu1, sequence data | Pempheris klunzingeri (Rough Bullseye), fPemKlu1, sequence data (Ocean Genomes) |
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