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Genome Information for Tiliqua scincoides
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The blue-tongued skink (Tiliqua scincoides) is a lizard species native to Australia as well Tanimbar Island in Maluku Province, Indonesia. As its name implies, this species has a blue tongue. This sample is from a male in Southern Australia, collected by Jessica Nowicki, and coordinated by Lauren O'Connell to generate a high-quality reference genome that is contributed to the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.
| Accession | PRJNA1061193 |
| Type | Umbrella project |
| Organism | Tiliqua scincoides[Taxonomy ID: 71010] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Scincidae; Egerniinae; Tiliqua; Tiliqua scincoides |
| Submission | Registration date: 4-Jan-2024
Vertebrate Genomes Project |
| Relevance | Reference genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 33680 |
| WGS master | 2 |
| Transcript | 33280 |
| SRA Experiments | 9 |
| Protein Sequences | 31512 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes SRA or Trace Total |
3
1
4
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA1014189 | Chromosomes | Tiliqua scincoides | Tiliqua scincoides (blue-tongue skink) genome, rTilSci1, haplotype 1 (Vertebrate Genomes Project) | | PRJNA1014188 | Chromosomes | Tiliqua scincoides | Tiliqua scincoides (blue-tongue skink) genome, rTilSci1, haplotype 2 (Vertebrate Genomes Project) | | PRJNA1136870 | Chromosomes | Tiliqua scincoides | Tiliqua scincoides isolate:rTilSci1 RefSeq Genome sequencing and assembly (NCBI) | | PRJNA1139171 | SRA or Trace | Tiliqua scincoides (blue-tongue skink) genome, rTilSci1, sequence data | Tiliqua scincoides (blue-tongue skink) genome, rTilSci1, sequence data (Vertebrate Genomes Project) |
|