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Genome Information for Cyclopterus lumpus
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This project collects the sequencing data and assemblies generated for Cyclopterus lumpus, common name lumpfish, to facilitate genome assembly and annotation as part of the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The data under this project are made available subject to the Darwin Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
| Accession | PRJEB65376 |
| Type | Umbrella project |
| Organism | Cyclopterus lumpus[Taxonomy ID: 8103] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus; Cyclopterus lumpus |
| Submission | Registration date: 25-Aug-2023
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 28 |
| WGS master | 2 |
| Genomic DNA | 26 |
| SRA Experiments | 3 |
| Other datasets |
| BioSample | 3 |
| Assembly | 2 |
fCycLum encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Contigs Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEB66139 | Contigs | Cyclopterus lumpus | Cyclopterus lumpus (lumpfish) genome assembly, fCycLum2, alternate haplotype (WELLCOME SANGER INSTITUTE) | | PRJEB66140 | Chromosomes | Cyclopterus lumpus | Cyclopterus lumpus (lumpfish) genome assembly, fCycLum2 (WELLCOME SANGER INSTITUTE) |
|
| Other | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJEB65375 | Cyclopterus lumpus | Cyclopterus lumpus (lumpfish), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) |
|