Taxonomy browser (Pantoea cypripedii)

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Taxonomy browser (Pantoea cypripedii)

Pantoea cypripedii

Taxonomy ID: 55209 (for references in articles please use NCBI:txid55209)

current name

Pantoea cypripedii (Hori 1911) Brady et al. 2010

type strain of Pantoea cypripedii: ATCC :29267, CFBP:3613, CIP:105195, DSM :3873, BCCM/LMG :2655, BCCM/LMG :2657, NCPPB:3004, ICMP :1591

homotypic synonym:

"Bacillus cypripedii" Hori 1911, effective name¹⁾

"Erwinia carotovora var. cypripedii" (Hori 1911) Dye 1969, effective name²⁾

Erwinia cypripedii (Hori 1911) Bergey et al. 1923 (Approved Lists 1980), nom. approb.³⁾

Pectobacterium cypripedii (Hori 1911) Brenner et al. 1973 (Approved Lists 1980) emend. Hauben et al. 1999, nom. approb.⁴⁾

Erwinia cyrpipedii

NCBI BLAST name: enterobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea

Entrez records
Database name	Direct links	Links from type
Nucleotide	244	41
Protein	26,449	-
Popset	49	-
PubMed Central	82	-
Gene	1	-
SRA Experiments	3	-
Identical Protein Groups	17,063	-
BioProject	6	-
BioSample	8	1
Datasets Genome	7	-
Taxonomy	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
4) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.

Comments and References:

Bergey DH et al. (1923)

Bergey, D.H., Harrison, F.C., Breed, R.S., Hammer B.W., and Huntoon, F.M. Bergey's Manual of Determinative Bacteriology, 1st ed. (1923) The Williams and Wilkins Co., Baltimore, pp. 1-442. [No PubMed record available.]

Brady CL et al. (2010b)

Brady, C.L., Cleenwerck, I., Venter, S.N., Engelbeen, K., De Vos, P., and Coutinho, T.A. "Emended description of the genus Pantoea, description of four species from human clinical samples, Pantoea septica sp. nov., Pantoea eucrina sp. nov., Pantoea brenneri sp. nov. and Pantoea conspicua sp. nov., and transfer of Pectobacterium cypripedii (Hori 1911) Brenner et al. 1973 emend. Hauben et al. 1998 to the genus as Pantoea cypripedii comb. nov." Int. J. Syst. Evol. Microbiol. (2010) 60:2430-2440.

Brenner DJ et al. (1973)

Brenner, D.J., Steigerwalt, A.G., Miklos, G.V., and Fanning, G.R. "Deoxyribonucleic acid relatedness among erwiniae and other Enterobacteriaceae: the soft-rot organisms (genus Pectobacterium Waldee)." Int. J. Syst. bacteriol. (1973) 23:205-216. [No PubMed record available.]

Dye DW (1969)

Dye, D.W. "A taxonomic study of the genus Erwinia." N. Z. J. Sci. Technol. (1969) 12:223-236. [No PubMed record available.]

Hauben L et al. (1998)

Hauben, L., Moore, E.R.B., Vauterin, L., Steenackers, M., Mergaert, J., Verdonck, L., and Swings, J. "Phylogenetic position of phytopathogens within the Enterobacteriaceae." Syst. Appl. Microbiol. (1998) 21:384-397.

Hori S (1911)

Hori, S. "A bacterial leaf-disease of tropical orchids." Zentrabl. Bakteriol. Parasitenk. Infektionskr. Hyg. Abt. II (1911) 31:85-92. [No PubMed record available.]

Skerman VBD et al. (1980) (Pectobacterium cypripedii)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.

Skerman VBD et al. (1980) (Erwinia cypripedii)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.

Young JM et al. (1996) (reference with type strain information)

Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Pantoea cypripedii	meta-databases	BacDive
Erwinia cypripedii (Hori 1911) Bergey et al. 1923 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 3 Organisms	organism-specific	Genomes On Line Database
Pectobacterium cypripedii	culture/stock collections	Global Catalogue of Microorganisms
3 records from this provider	organism-specific	Integrated Microbial Genomes
Pantoea cypripedii \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Erwinia cypripedii	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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